FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1630342_s_at:

>probe:Drosophila_2:1630342_s_at:331:271; Interrogation_Position=2146; Antisense; CATCGAGGGCGACAAAATGTTCAAA
>probe:Drosophila_2:1630342_s_at:606:193; Interrogation_Position=2170; Antisense; AACTCTGTAGTTTCAGCTCAAGATT
>probe:Drosophila_2:1630342_s_at:702:571; Interrogation_Position=2197; Antisense; GGCTAATGGCCAGCACTAGAGCTTT
>probe:Drosophila_2:1630342_s_at:48:419; Interrogation_Position=2215; Antisense; GAGCTTTAGGAACTCACTTTCCACA
>probe:Drosophila_2:1630342_s_at:497:147; Interrogation_Position=2230; Antisense; ACTTTCCACATCCTACTTAAGCTAA
>probe:Drosophila_2:1630342_s_at:248:685; Interrogation_Position=2271; Antisense; TATCGTATTATTTTAGTCCATGTTT
>probe:Drosophila_2:1630342_s_at:9:603; Interrogation_Position=2291; Antisense; TGTTTTACTTCTGTATTTCTTCCAA
>probe:Drosophila_2:1630342_s_at:137:93; Interrogation_Position=2358; Antisense; AGTTCTTTTGTCCTTTCTTGTATTG
>probe:Drosophila_2:1630342_s_at:459:723; Interrogation_Position=2412; Antisense; TTGAGATGCCATCCAATTAGGAATT
>probe:Drosophila_2:1630342_s_at:441:199; Interrogation_Position=2480; Antisense; AACCTATTACCATGACATTTCCCAC
>probe:Drosophila_2:1630342_s_at:347:273; Interrogation_Position=2495; Antisense; CATTTCCCACGTCCCAATTATTATT
>probe:Drosophila_2:1630342_s_at:243:635; Interrogation_Position=2519; Antisense; TTGGTTTTCCCATATTTTTTCAATG
>probe:Drosophila_2:1630342_s_at:714:1; Interrogation_Position=2570; Antisense; ATTGAACTACAAACCGATCCATAAC
>probe:Drosophila_2:1630342_s_at:404:663; Interrogation_Position=2721; Antisense; TAAACACTTGTTTATTTCTTCATCA

Paste this into a BLAST search page for me
CATCGAGGGCGACAAAATGTTCAAAAACTCTGTAGTTTCAGCTCAAGATTGGCTAATGGCCAGCACTAGAGCTTTGAGCTTTAGGAACTCACTTTCCACAACTTTCCACATCCTACTTAAGCTAATATCGTATTATTTTAGTCCATGTTTTGTTTTACTTCTGTATTTCTTCCAAAGTTCTTTTGTCCTTTCTTGTATTGTTGAGATGCCATCCAATTAGGAATTAACCTATTACCATGACATTTCCCACCATTTCCCACGTCCCAATTATTATTTTGGTTTTCCCATATTTTTTCAATGATTGAACTACAAACCGATCCATAACTAAACACTTGTTTATTTCTTCATCA

Full Affymetrix probeset data:

Annotations for 1630342_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720