FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1630369_a_at:

>probe:Drosophila_2:1630369_a_at:494:159; Interrogation_Position=1400; Antisense; ACAACGTGATGAGCACTGGCGGCGT
>probe:Drosophila_2:1630369_a_at:153:57; Interrogation_Position=1450; Antisense; ATGAGCAGAAATCGCCGCCGCCAGT
>probe:Drosophila_2:1630369_a_at:538:299; Interrogation_Position=1468; Antisense; CGCCAGTGCGTTACGTTGTTATCAA
>probe:Drosophila_2:1630369_a_at:333:333; Interrogation_Position=1526; Antisense; GCTGGAGCACGAGCTAGTTTCTAAT
>probe:Drosophila_2:1630369_a_at:676:91; Interrogation_Position=1541; Antisense; AGTTTCTAATGATTCGCCCATGCAA
>probe:Drosophila_2:1630369_a_at:331:321; Interrogation_Position=1556; Antisense; GCCCATGCAAAACTCGGACACTAGC
>probe:Drosophila_2:1630369_a_at:162:255; Interrogation_Position=1624; Antisense; CAAACATAAGTCCACACCCATATTG
>probe:Drosophila_2:1630369_a_at:373:273; Interrogation_Position=1642; Antisense; CATATTGTATTTTTTGGGAGCCACA
>probe:Drosophila_2:1630369_a_at:416:491; Interrogation_Position=1724; Antisense; GTACACAAATCCACACACACAGTTG
>probe:Drosophila_2:1630369_a_at:1:59; Interrogation_Position=1762; Antisense; ATGATTTCAGGCCAACTCTGCGGTT
>probe:Drosophila_2:1630369_a_at:547:311; Interrogation_Position=1772; Antisense; GCCAACTCTGCGGTTTACAATTGAA
>probe:Drosophila_2:1630369_a_at:401:141; Interrogation_Position=1812; Antisense; ACGGATGTCGATCATGGCCCATGTA
>probe:Drosophila_2:1630369_a_at:308:655; Interrogation_Position=1872; Antisense; TAATGTTAGAGCTCACGATCACCCG
>probe:Drosophila_2:1630369_a_at:684:453; Interrogation_Position=1888; Antisense; GATCACCCGCTATTGTGTAATAACC

Paste this into a BLAST search page for me
ACAACGTGATGAGCACTGGCGGCGTATGAGCAGAAATCGCCGCCGCCAGTCGCCAGTGCGTTACGTTGTTATCAAGCTGGAGCACGAGCTAGTTTCTAATAGTTTCTAATGATTCGCCCATGCAAGCCCATGCAAAACTCGGACACTAGCCAAACATAAGTCCACACCCATATTGCATATTGTATTTTTTGGGAGCCACAGTACACAAATCCACACACACAGTTGATGATTTCAGGCCAACTCTGCGGTTGCCAACTCTGCGGTTTACAATTGAAACGGATGTCGATCATGGCCCATGTATAATGTTAGAGCTCACGATCACCCGGATCACCCGCTATTGTGTAATAACC

Full Affymetrix probeset data:

Annotations for 1630369_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720