FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1630408_s_at:

>probe:Drosophila_2:1630408_s_at:77:319; Interrogation_Position=1540; Antisense; GCCGATGTCCGTGAACTGGGCATCA
>probe:Drosophila_2:1630408_s_at:214:33; Interrogation_Position=1561; Antisense; ATCACCGAGTCGTTCGCCGTTAAGC
>probe:Drosophila_2:1630408_s_at:191:319; Interrogation_Position=1576; Antisense; GCCGTTAAGCGCCAAGTTCTGATGT
>probe:Drosophila_2:1630408_s_at:443:71; Interrogation_Position=1610; Antisense; AGGCTGCCGAGATGATCTTGCGCGT
>probe:Drosophila_2:1630408_s_at:103:723; Interrogation_Position=1627; Antisense; TTGCGCGTGGACAACATCATCCGTT
>probe:Drosophila_2:1630408_s_at:721:521; Interrogation_Position=1680; Antisense; GGGCTACTGCTAGGCGCTTAAGTAT
>probe:Drosophila_2:1630408_s_at:677:639; Interrogation_Position=1741; Antisense; TCTCGTTTAACATCATCGCTAACCT
>probe:Drosophila_2:1630408_s_at:178:631; Interrogation_Position=1756; Antisense; TCGCTAACCTTACACGTTCTGTTTA
>probe:Drosophila_2:1630408_s_at:376:707; Interrogation_Position=1808; Antisense; TTAGCAATTATATCACACGTCCCAC
>probe:Drosophila_2:1630408_s_at:80:257; Interrogation_Position=1836; Antisense; CAAAGTCGCACAATTTCTCGCTAAA
>probe:Drosophila_2:1630408_s_at:484:297; Interrogation_Position=1854; Antisense; CGCTAAATTTGTCCCTGTCGTGTAA
>probe:Drosophila_2:1630408_s_at:131:501; Interrogation_Position=1870; Antisense; GTCGTGTAATCCTTCTACTTAATTG
>probe:Drosophila_2:1630408_s_at:281:253; Interrogation_Position=1918; Antisense; CAAGCTGAGCTTTTGATTCGAGGAT
>probe:Drosophila_2:1630408_s_at:115:433; Interrogation_Position=1943; Antisense; GAGTGCTGCGATCAAACCAAAACAT

Paste this into a BLAST search page for me
GCCGATGTCCGTGAACTGGGCATCAATCACCGAGTCGTTCGCCGTTAAGCGCCGTTAAGCGCCAAGTTCTGATGTAGGCTGCCGAGATGATCTTGCGCGTTTGCGCGTGGACAACATCATCCGTTGGGCTACTGCTAGGCGCTTAAGTATTCTCGTTTAACATCATCGCTAACCTTCGCTAACCTTACACGTTCTGTTTATTAGCAATTATATCACACGTCCCACCAAAGTCGCACAATTTCTCGCTAAACGCTAAATTTGTCCCTGTCGTGTAAGTCGTGTAATCCTTCTACTTAATTGCAAGCTGAGCTTTTGATTCGAGGATGAGTGCTGCGATCAAACCAAAACAT

Full Affymetrix probeset data:

Annotations for 1630408_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720