FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1630558_a_at:

>probe:Drosophila_2:1630558_a_at:514:407; Interrogation_Position=1653; Antisense; GACGTCGGAGTACATGCACACCTAT
>probe:Drosophila_2:1630558_a_at:399:87; Interrogation_Position=1739; Antisense; AGTCGGACATGGTCTTCATCGACCA
>probe:Drosophila_2:1630558_a_at:256:713; Interrogation_Position=1753; Antisense; TTCATCGACCATCCAAGCGTTGAGA
>probe:Drosophila_2:1630558_a_at:672:551; Interrogation_Position=1785; Antisense; GGAGAACTCCCTATCCACATATGAG
>probe:Drosophila_2:1630558_a_at:180:25; Interrogation_Position=1803; Antisense; ATATGAGCCACATGGCTGCGTCGTG
>probe:Drosophila_2:1630558_a_at:655:497; Interrogation_Position=1828; Antisense; GTCTTCTCGGTGGTGGATCGCAGCT
>probe:Drosophila_2:1630558_a_at:380:289; Interrogation_Position=1957; Antisense; CGGCTTATCACATCACAGGAGGGCA
>probe:Drosophila_2:1630558_a_at:109:317; Interrogation_Position=1993; Antisense; GCCTCACGCGATGCCAAATTTATTG
>probe:Drosophila_2:1630558_a_at:635:699; Interrogation_Position=2011; Antisense; TTTATTGAGACGTCTAGCGGCATAC
>probe:Drosophila_2:1630558_a_at:353:675; Interrogation_Position=2025; Antisense; TAGCGGCATACAGCACAACGTCGAT
>probe:Drosophila_2:1630558_a_at:386:57; Interrogation_Position=2048; Antisense; ATGAGCTGCTCGTCGGCATATTGAA
>probe:Drosophila_2:1630558_a_at:383:227; Interrogation_Position=2104; Antisense; AAGGCCACCGCCTCGAAGATGAAGA
>probe:Drosophila_2:1630558_a_at:668:271; Interrogation_Position=2142; Antisense; CATATCGCTGCACTTGGCCAAGGAA
>probe:Drosophila_2:1630558_a_at:620:109; Interrogation_Position=2174; Antisense; AGAAGATCTGCCTCAGCGACATCTC

Paste this into a BLAST search page for me
GACGTCGGAGTACATGCACACCTATAGTCGGACATGGTCTTCATCGACCATTCATCGACCATCCAAGCGTTGAGAGGAGAACTCCCTATCCACATATGAGATATGAGCCACATGGCTGCGTCGTGGTCTTCTCGGTGGTGGATCGCAGCTCGGCTTATCACATCACAGGAGGGCAGCCTCACGCGATGCCAAATTTATTGTTTATTGAGACGTCTAGCGGCATACTAGCGGCATACAGCACAACGTCGATATGAGCTGCTCGTCGGCATATTGAAAAGGCCACCGCCTCGAAGATGAAGACATATCGCTGCACTTGGCCAAGGAAAGAAGATCTGCCTCAGCGACATCTC

Full Affymetrix probeset data:

Annotations for 1630558_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720