FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1630616_at:

>probe:Drosophila_2:1630616_at:562:685; Interrogation_Position=1002; Antisense; TATTTCGGAGGCTCAGTACCACGGA
>probe:Drosophila_2:1630616_at:284:269; Interrogation_Position=1032; Antisense; CATGCTCTCTTTGCCGGTTTTTGGA
>probe:Drosophila_2:1630616_at:521:539; Interrogation_Position=1047; Antisense; GGTTTTTGGAGACCAGCCCGGCAAT
>probe:Drosophila_2:1630616_at:718:387; Interrogation_Position=1086; Antisense; GAAAAGTGGCTTCGGTCTCACACTC
>probe:Drosophila_2:1630616_at:157:549; Interrogation_Position=1128; Antisense; GGAGGAACCCTTTAGAGCTGCCGTA
>probe:Drosophila_2:1630616_at:708:335; Interrogation_Position=1144; Antisense; GCTGCCGTACTGGAGATCTTGTCAA
>probe:Drosophila_2:1630616_at:383:127; Interrogation_Position=1180; Antisense; AGCCAACGAGTGGTCAAGTTCTCCT
>probe:Drosophila_2:1630616_at:223:219; Interrogation_Position=1227; Antisense; AAGTGCCCGGGAATCGTTGATCTTC
>probe:Drosophila_2:1630616_at:352:669; Interrogation_Position=1261; Antisense; TACGTCATTCGCCACCATGGAGCAG
>probe:Drosophila_2:1630616_at:660:355; Interrogation_Position=1308; Antisense; GCACATGGACTTCATAGCCGCAAAT
>probe:Drosophila_2:1630616_at:119:409; Interrogation_Position=880; Antisense; GACGATCTCGATAAGACGCCCGGGA
>probe:Drosophila_2:1630616_at:180:371; Interrogation_Position=903; Antisense; GAAGTCCGACAATATTCTCTACTCC
>probe:Drosophila_2:1630616_at:529:727; Interrogation_Position=930; Antisense; TTGGCTGCCACAGGACGACATACTG
>probe:Drosophila_2:1630616_at:702:299; Interrogation_Position=956; Antisense; CCCATCCGAGCGTCAAACTATTTAT

Paste this into a BLAST search page for me
TATTTCGGAGGCTCAGTACCACGGACATGCTCTCTTTGCCGGTTTTTGGAGGTTTTTGGAGACCAGCCCGGCAATGAAAAGTGGCTTCGGTCTCACACTCGGAGGAACCCTTTAGAGCTGCCGTAGCTGCCGTACTGGAGATCTTGTCAAAGCCAACGAGTGGTCAAGTTCTCCTAAGTGCCCGGGAATCGTTGATCTTCTACGTCATTCGCCACCATGGAGCAGGCACATGGACTTCATAGCCGCAAATGACGATCTCGATAAGACGCCCGGGAGAAGTCCGACAATATTCTCTACTCCTTGGCTGCCACAGGACGACATACTGCCCATCCGAGCGTCAAACTATTTAT

Full Affymetrix probeset data:

Annotations for 1630616_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720