FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1630635_s_at:

>probe:Drosophila_2:1630635_s_at:672:207; Interrogation_Position=1956; Antisense; AAGCTGCTGCATCCGTTGATCTTTC
>probe:Drosophila_2:1630635_s_at:321:605; Interrogation_Position=1972; Antisense; TGATCTTTCGGCTGTGCGAGCGTTT
>probe:Drosophila_2:1630635_s_at:345:535; Interrogation_Position=2102; Antisense; GGTGAATCACGGCTACGAGTCCTCG
>probe:Drosophila_2:1630635_s_at:199:375; Interrogation_Position=2141; Antisense; GAAGAGCAGTCCCATCGCCGTGGTA
>probe:Drosophila_2:1630635_s_at:256:519; Interrogation_Position=2160; Antisense; GTGGTATTCACCACCTCCGAGGGAA
>probe:Drosophila_2:1630635_s_at:587:47; Interrogation_Position=2229; Antisense; ATCCAATTGGACATTGTGCCGGGCG
>probe:Drosophila_2:1630635_s_at:142:293; Interrogation_Position=2289; Antisense; CGATCTGCGCTCTGAGGGTTAACTA
>probe:Drosophila_2:1630635_s_at:662:345; Interrogation_Position=2318; Antisense; GCATACGTAGATAGTCTGACCCTAA
>probe:Drosophila_2:1630635_s_at:427:475; Interrogation_Position=2386; Antisense; GTTAGTTAGCCAAGTGTTTCATGTC
>probe:Drosophila_2:1630635_s_at:126:447; Interrogation_Position=2417; Antisense; GATGCTGTGATTTTCTGTGCGCGAC
>probe:Drosophila_2:1630635_s_at:681:285; Interrogation_Position=2431; Antisense; CTGTGCGCGACTGTTGTTGAGCAAT
>probe:Drosophila_2:1630635_s_at:689:607; Interrogation_Position=2448; Antisense; TGAGCAATTGCTCGCGCATTTCATT
>probe:Drosophila_2:1630635_s_at:361:635; Interrogation_Position=2459; Antisense; TCGCGCATTTCATTCGCATGTACTT
>probe:Drosophila_2:1630635_s_at:627:63; Interrogation_Position=2491; Antisense; ATGTGTGTGCGTGTCAGCATGCAAT

Paste this into a BLAST search page for me
AAGCTGCTGCATCCGTTGATCTTTCTGATCTTTCGGCTGTGCGAGCGTTTGGTGAATCACGGCTACGAGTCCTCGGAAGAGCAGTCCCATCGCCGTGGTAGTGGTATTCACCACCTCCGAGGGAAATCCAATTGGACATTGTGCCGGGCGCGATCTGCGCTCTGAGGGTTAACTAGCATACGTAGATAGTCTGACCCTAAGTTAGTTAGCCAAGTGTTTCATGTCGATGCTGTGATTTTCTGTGCGCGACCTGTGCGCGACTGTTGTTGAGCAATTGAGCAATTGCTCGCGCATTTCATTTCGCGCATTTCATTCGCATGTACTTATGTGTGTGCGTGTCAGCATGCAAT

Full Affymetrix probeset data:

Annotations for 1630635_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720