FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1630636_s_at:

>probe:Drosophila_2:1630636_s_at:645:403; Interrogation_Position=2373; Antisense; GATCGGTTCGGCTCGGCACGTTTCG
>probe:Drosophila_2:1630636_s_at:344:275; Interrogation_Position=2398; Antisense; GTTCGCCGCGTATCCGGTGGAAAGA
>probe:Drosophila_2:1630636_s_at:155:61; Interrogation_Position=2426; Antisense; ATGTATGTAGTGCAGTTGAGTCGAC
>probe:Drosophila_2:1630636_s_at:507:101; Interrogation_Position=2461; Antisense; AGAGCAACATTACCTACACTTTACC
>probe:Drosophila_2:1630636_s_at:16:279; Interrogation_Position=2474; Antisense; CTACACTTTACCACAACAACATTCA
>probe:Drosophila_2:1630636_s_at:617:659; Interrogation_Position=2592; Antisense; TAACGAGATGCGAACACCCAACACA
>probe:Drosophila_2:1630636_s_at:128:107; Interrogation_Position=2640; Antisense; AGACACACACAACCCGACATAACAT
>probe:Drosophila_2:1630636_s_at:635:417; Interrogation_Position=2685; Antisense; GAGCGGAATATAGGATCCCGATCCA
>probe:Drosophila_2:1630636_s_at:443:545; Interrogation_Position=2697; Antisense; GGATCCCGATCCAGAAGGCAGTAAG
>probe:Drosophila_2:1630636_s_at:182:493; Interrogation_Position=2717; Antisense; GTAAGCAGCACCACAAACAACATTT
>probe:Drosophila_2:1630636_s_at:440:651; Interrogation_Position=2741; Antisense; TCAATAGCATAGAAAGCGCGCCAAG
>probe:Drosophila_2:1630636_s_at:124:377; Interrogation_Position=2777; Antisense; GAAGAATCCGATCAAGAATCCGAAG
>probe:Drosophila_2:1630636_s_at:346:429; Interrogation_Position=2830; Antisense; GAGTTCAGAATGCAGCGTTAACGTA
>probe:Drosophila_2:1630636_s_at:408:395; Interrogation_Position=2916; Antisense; GAAATCGATATTTTTACACAGTCAA

Paste this into a BLAST search page for me
GATCGGTTCGGCTCGGCACGTTTCGGTTCGCCGCGTATCCGGTGGAAAGAATGTATGTAGTGCAGTTGAGTCGACAGAGCAACATTACCTACACTTTACCCTACACTTTACCACAACAACATTCATAACGAGATGCGAACACCCAACACAAGACACACACAACCCGACATAACATGAGCGGAATATAGGATCCCGATCCAGGATCCCGATCCAGAAGGCAGTAAGGTAAGCAGCACCACAAACAACATTTTCAATAGCATAGAAAGCGCGCCAAGGAAGAATCCGATCAAGAATCCGAAGGAGTTCAGAATGCAGCGTTAACGTAGAAATCGATATTTTTACACAGTCAA

Full Affymetrix probeset data:

Annotations for 1630636_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720