FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1630653_a_at:

>probe:Drosophila_2:1630653_a_at:391:347; Interrogation_Position=1307; Antisense; GCACCATCTGCCTGGACGAATAGGA
>probe:Drosophila_2:1630653_a_at:314:407; Interrogation_Position=1330; Antisense; GACGGGATGGGATATGCCTATCTCC
>probe:Drosophila_2:1630653_a_at:38:315; Interrogation_Position=1345; Antisense; GCCTATCTCCCGAATTGTTGTTATC
>probe:Drosophila_2:1630653_a_at:23:687; Interrogation_Position=1374; Antisense; TATAGCTTGTTGTTAAACCACCTTT
>probe:Drosophila_2:1630653_a_at:695:703; Interrogation_Position=1386; Antisense; TTAAACCACCTTTTGATCCACTGAT
>probe:Drosophila_2:1630653_a_at:627:447; Interrogation_Position=1400; Antisense; GATCCACTGATCCAATGACCCACGA
>probe:Drosophila_2:1630653_a_at:548:231; Interrogation_Position=1413; Antisense; AATGACCCACGAACAACCCGATCAA
>probe:Drosophila_2:1630653_a_at:195:455; Interrogation_Position=1432; Antisense; GATCAACTGAACACCGAACGCGAAG
>probe:Drosophila_2:1630653_a_at:52:133; Interrogation_Position=1444; Antisense; ACCGAACGCGAAGTTATTTGCATAA
>probe:Drosophila_2:1630653_a_at:516:481; Interrogation_Position=1492; Antisense; GTATTTCCCATAAACCAGAACTAGA
>probe:Drosophila_2:1630653_a_at:522:301; Interrogation_Position=1531; Antisense; CCCTCCTCTTGCTGATATTTTCAAA
>probe:Drosophila_2:1630653_a_at:246:487; Interrogation_Position=1576; Antisense; GTAGCTGCTGTTACTTAGGTTTTAG
>probe:Drosophila_2:1630653_a_at:547:171; Interrogation_Position=1694; Antisense; AAAGACATCCCCACGAAGAAGAAGA
>probe:Drosophila_2:1630653_a_at:454:33; Interrogation_Position=1746; Antisense; ATCAAACAATTCCTTGAGACCCCGC

Paste this into a BLAST search page for me
GCACCATCTGCCTGGACGAATAGGAGACGGGATGGGATATGCCTATCTCCGCCTATCTCCCGAATTGTTGTTATCTATAGCTTGTTGTTAAACCACCTTTTTAAACCACCTTTTGATCCACTGATGATCCACTGATCCAATGACCCACGAAATGACCCACGAACAACCCGATCAAGATCAACTGAACACCGAACGCGAAGACCGAACGCGAAGTTATTTGCATAAGTATTTCCCATAAACCAGAACTAGACCCTCCTCTTGCTGATATTTTCAAAGTAGCTGCTGTTACTTAGGTTTTAGAAAGACATCCCCACGAAGAAGAAGAATCAAACAATTCCTTGAGACCCCGC

Full Affymetrix probeset data:

Annotations for 1630653_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720