FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1630938_a_at:

>probe:Drosophila_2:1630938_a_at:261:147; Interrogation_Position=1271; Antisense; ACACCTGTTTTCTTTACGTTCTATG
>probe:Drosophila_2:1630938_a_at:636:697; Interrogation_Position=1352; Antisense; TTTATGCCCCATTTCTTGCAACATA
>probe:Drosophila_2:1630938_a_at:156:7; Interrogation_Position=1399; Antisense; ATTGCTGGATTGCAGCGTTTTCCAC
>probe:Drosophila_2:1630938_a_at:647:351; Interrogation_Position=1410; Antisense; GCAGCGTTTTCCACTTATATCTTTA
>probe:Drosophila_2:1630938_a_at:228:151; Interrogation_Position=1498; Antisense; ACATTCACGGACTACATACATACAT
>probe:Drosophila_2:1630938_a_at:489:61; Interrogation_Position=1527; Antisense; ATGTCAGTCACATATCACTCACCTC
>probe:Drosophila_2:1630938_a_at:334:129; Interrogation_Position=1547; Antisense; ACCTCGGTGCTATCTGTCTTATGAC
>probe:Drosophila_2:1630938_a_at:315:705; Interrogation_Position=1565; Antisense; TTATGACGTCACTTTAGCTCTGCTA
>probe:Drosophila_2:1630938_a_at:629:117; Interrogation_Position=1580; Antisense; AGCTCTGCTATGTCCTATTGCTATC
>probe:Drosophila_2:1630938_a_at:111:691; Interrogation_Position=1595; Antisense; TATTGCTATCCTTTGCAGTTGCTAA
>probe:Drosophila_2:1630938_a_at:430:29; Interrogation_Position=1681; Antisense; ATACACCTTGAGTTTCTGTTTCGCG
>probe:Drosophila_2:1630938_a_at:6:695; Interrogation_Position=1699; Antisense; TTTCGCGCTTGCTAAAGTCTTCCAT
>probe:Drosophila_2:1630938_a_at:23:273; Interrogation_Position=1777; Antisense; CATATGTATACAGACCACGCCAAGT
>probe:Drosophila_2:1630938_a_at:536:397; Interrogation_Position=1816; Antisense; GACAAGTGCGTTTTCCACAAATTAA

Paste this into a BLAST search page for me
ACACCTGTTTTCTTTACGTTCTATGTTTATGCCCCATTTCTTGCAACATAATTGCTGGATTGCAGCGTTTTCCACGCAGCGTTTTCCACTTATATCTTTAACATTCACGGACTACATACATACATATGTCAGTCACATATCACTCACCTCACCTCGGTGCTATCTGTCTTATGACTTATGACGTCACTTTAGCTCTGCTAAGCTCTGCTATGTCCTATTGCTATCTATTGCTATCCTTTGCAGTTGCTAAATACACCTTGAGTTTCTGTTTCGCGTTTCGCGCTTGCTAAAGTCTTCCATCATATGTATACAGACCACGCCAAGTGACAAGTGCGTTTTCCACAAATTAA

Full Affymetrix probeset data:

Annotations for 1630938_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720