FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1630996_s_at:

>probe:Drosophila_2:1630996_s_at:6:591; Interrogation_Position=1496; Antisense; TGGTTTGACGACAGCCACATCAGGC
>probe:Drosophila_2:1630996_s_at:201:187; Interrogation_Position=1523; Antisense; AACAACATGTACACTTTGCCACGAC
>probe:Drosophila_2:1630996_s_at:108:459; Interrogation_Position=1612; Antisense; GATATAATGTACGAGCCACGCGCCA
>probe:Drosophila_2:1630996_s_at:299:203; Interrogation_Position=1639; Antisense; AACCTAGTGGTCTCCAGCGCACAGG
>probe:Drosophila_2:1630996_s_at:173:123; Interrogation_Position=1654; Antisense; AGCGCACAGGTGGACGTCAATCTCG
>probe:Drosophila_2:1630996_s_at:49:477; Interrogation_Position=1669; Antisense; GTCAATCTCGGCCTGACGGTGACCG
>probe:Drosophila_2:1630996_s_at:688:527; Interrogation_Position=1706; Antisense; GGGAGCTTCAGTTGCAGGCCGAACA
>probe:Drosophila_2:1630996_s_at:211:347; Interrogation_Position=1719; Antisense; GCAGGCCGAACAGCAGTATCAGGAG
>probe:Drosophila_2:1630996_s_at:678:79; Interrogation_Position=1745; Antisense; AGGTGTCACCACTGAGTACCAGGAA
>probe:Drosophila_2:1630996_s_at:26:229; Interrogation_Position=1768; Antisense; AATGGCGACGAGGTGGCACTCTAAT
>probe:Drosophila_2:1630996_s_at:473:189; Interrogation_Position=1806; Antisense; TAACGTTAATTGTGCAAACCGCTGC
>probe:Drosophila_2:1630996_s_at:576:175; Interrogation_Position=1821; Antisense; AAACCGCTGCAATGGAGACTGGTCT
>probe:Drosophila_2:1630996_s_at:282:315; Interrogation_Position=1846; Antisense; GCCATGGTGCAGCTTTCGTGTTTTT
>probe:Drosophila_2:1630996_s_at:62:537; Interrogation_Position=1928; Antisense; GGTCGATTGACCATTGAGCTAGTTT

Paste this into a BLAST search page for me
TGGTTTGACGACAGCCACATCAGGCAACAACATGTACACTTTGCCACGACGATATAATGTACGAGCCACGCGCCAAACCTAGTGGTCTCCAGCGCACAGGAGCGCACAGGTGGACGTCAATCTCGGTCAATCTCGGCCTGACGGTGACCGGGGAGCTTCAGTTGCAGGCCGAACAGCAGGCCGAACAGCAGTATCAGGAGAGGTGTCACCACTGAGTACCAGGAAAATGGCGACGAGGTGGCACTCTAATTAACGTTAATTGTGCAAACCGCTGCAAACCGCTGCAATGGAGACTGGTCTGCCATGGTGCAGCTTTCGTGTTTTTGGTCGATTGACCATTGAGCTAGTTT

Full Affymetrix probeset data:

Annotations for 1630996_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720