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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1631024_s_at:

>probe:Drosophila_2:1631024_s_at:124:289; Interrogation_Position=2062; Antisense; CGGCCACACGTATTAATGCCGGTGT
>probe:Drosophila_2:1631024_s_at:46:619; Interrogation_Position=2086; Antisense; TGCGAGGATTTTTGGTCCGCCGGCT
>probe:Drosophila_2:1631024_s_at:724:315; Interrogation_Position=2104; Antisense; GCCGGCTTTTTGCAACCGAGCAAGT
>probe:Drosophila_2:1631024_s_at:172:221; Interrogation_Position=2125; Antisense; AAGTGCAGCGCATTGTCCAAACCAT
>probe:Drosophila_2:1631024_s_at:30:425; Interrogation_Position=2152; Antisense; GAGACACCCTGATCTTCGTGTTGAA
>probe:Drosophila_2:1631024_s_at:102:467; Interrogation_Position=2171; Antisense; GTTGAACCTGCACCTGGAAACTTGT
>probe:Drosophila_2:1631024_s_at:415:191; Interrogation_Position=2189; Antisense; AACTTGTGGACATGGCCTGGATGCA
>probe:Drosophila_2:1631024_s_at:471:75; Interrogation_Position=2215; Antisense; AGGAGCCTGCAAACTTGCGCCTCAA
>probe:Drosophila_2:1631024_s_at:25:281; Interrogation_Position=2235; Antisense; CTCAAGGCGCGATTGCTTCAACAGA
>probe:Drosophila_2:1631024_s_at:38:151; Interrogation_Position=2260; Antisense; ACAGCTGTTTGGCAAAAGCCCGCGT
>probe:Drosophila_2:1631024_s_at:541:205; Interrogation_Position=2275; Antisense; AAGCCCGCGTGATTTTTTGCAGCCA
>probe:Drosophila_2:1631024_s_at:139:211; Interrogation_Position=2307; Antisense; AAGACATTGCGGAGCTTTCTAGACA
>probe:Drosophila_2:1631024_s_at:222:117; Interrogation_Position=2319; Antisense; AGCTTTCTAGACAAATTCGCCCTGA
>probe:Drosophila_2:1631024_s_at:193:173; Interrogation_Position=2343; Antisense; AAAGCTGCGGCGGATTGCCAAAACA

Paste this into a BLAST search page for me
CGGCCACACGTATTAATGCCGGTGTTGCGAGGATTTTTGGTCCGCCGGCTGCCGGCTTTTTGCAACCGAGCAAGTAAGTGCAGCGCATTGTCCAAACCATGAGACACCCTGATCTTCGTGTTGAAGTTGAACCTGCACCTGGAAACTTGTAACTTGTGGACATGGCCTGGATGCAAGGAGCCTGCAAACTTGCGCCTCAACTCAAGGCGCGATTGCTTCAACAGAACAGCTGTTTGGCAAAAGCCCGCGTAAGCCCGCGTGATTTTTTGCAGCCAAAGACATTGCGGAGCTTTCTAGACAAGCTTTCTAGACAAATTCGCCCTGAAAAGCTGCGGCGGATTGCCAAAACA

Full Affymetrix probeset data:

Annotations for 1631024_s_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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