Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1631045_a_at:

>probe:Drosophila_2:1631045_a_at:139:275; Interrogation_Position=1544; Antisense; CATTCCTTCGATCCGTAGAGTGCTA
>probe:Drosophila_2:1631045_a_at:9:679; Interrogation_Position=1559; Antisense; TAGAGTGCTACGACCCTCAGACGGA
>probe:Drosophila_2:1631045_a_at:713:231; Interrogation_Position=1605; Antisense; AATGAATTGCAAACGCTCGCGGGTG
>probe:Drosophila_2:1631045_a_at:592:581; Interrogation_Position=1634; Antisense; TGGCCGCCAACATGGGCAAACTGTG
>probe:Drosophila_2:1631045_a_at:16:195; Interrogation_Position=1652; Antisense; AACTGTGGGCCATCGGCGGCTATGA
>probe:Drosophila_2:1631045_a_at:52:295; Interrogation_Position=1701; Antisense; CGAGGTGTACGATCCGGAGACCGAC
>probe:Drosophila_2:1631045_a_at:86:399; Interrogation_Position=1723; Antisense; GACAAATGGACCTTTATGCCGCCCA
>probe:Drosophila_2:1631045_a_at:172:535; Interrogation_Position=1779; Antisense; GGTCATACGGATCGAGTAACCCACT
>probe:Drosophila_2:1631045_a_at:37:675; Interrogation_Position=1830; Antisense; TAGCCACACTCGTCTTAGGTAATTT
>probe:Drosophila_2:1631045_a_at:518:199; Interrogation_Position=1903; Antisense; AACCAAGCTTTAGTGGCACCTCGTG
>probe:Drosophila_2:1631045_a_at:677:117; Interrogation_Position=1954; Antisense; AGCTCTTGCAGCTCTATCAAAATTG
>probe:Drosophila_2:1631045_a_at:96:473; Interrogation_Position=1978; Antisense; GTTCATATACTACTCACAGCTCTAT
>probe:Drosophila_2:1631045_a_at:127:117; Interrogation_Position=1995; Antisense; AGCTCTATAGATTTTGTCATTCCAG
>probe:Drosophila_2:1631045_a_at:377:601; Interrogation_Position=2029; Antisense; TGTTTAGTTACTACGCCTAGCCTTA

Paste this into a BLAST search page for me
CATTCCTTCGATCCGTAGAGTGCTATAGAGTGCTACGACCCTCAGACGGAAATGAATTGCAAACGCTCGCGGGTGTGGCCGCCAACATGGGCAAACTGTGAACTGTGGGCCATCGGCGGCTATGACGAGGTGTACGATCCGGAGACCGACGACAAATGGACCTTTATGCCGCCCAGGTCATACGGATCGAGTAACCCACTTAGCCACACTCGTCTTAGGTAATTTAACCAAGCTTTAGTGGCACCTCGTGAGCTCTTGCAGCTCTATCAAAATTGGTTCATATACTACTCACAGCTCTATAGCTCTATAGATTTTGTCATTCCAGTGTTTAGTTACTACGCCTAGCCTTA

Full Affymetrix probeset data:

Annotations for 1631045_a_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime