FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1631068_a_at:

>probe:Drosophila_2:1631068_a_at:137:629; Interrogation_Position=1371; Antisense; TAAGGCGCCCAAAGTACCGAAGGCA
>probe:Drosophila_2:1631068_a_at:431:567; Interrogation_Position=1428; Antisense; GGCACCAAGAGTACCGAAGGCACCA
>probe:Drosophila_2:1631068_a_at:48:355; Interrogation_Position=1447; Antisense; GCACCAAGAGTACCAAAGCCACCTA
>probe:Drosophila_2:1631068_a_at:446:317; Interrogation_Position=1539; Antisense; GCCGAAGCCGCCAAAGGTACCCAAG
>probe:Drosophila_2:1631068_a_at:127:343; Interrogation_Position=1591; Antisense; GCACCCAGGGTACCAAAAGCTCCAA
>probe:Drosophila_2:1631068_a_at:63:487; Interrogation_Position=1654; Antisense; GTACCGAAAGCACCAAGGCAACCGA
>probe:Drosophila_2:1631068_a_at:305:491; Interrogation_Position=1708; Antisense; GTAAAGGTACCGCTACCCATTGAGC
>probe:Drosophila_2:1631068_a_at:250:5; Interrogation_Position=1726; Antisense; ATTGAGCCCGTACCTCTAGAAACAC
>probe:Drosophila_2:1631068_a_at:495:389; Interrogation_Position=1744; Antisense; GAAACACCCACTTACATAAATCCTA
>probe:Drosophila_2:1631068_a_at:453:27; Interrogation_Position=1772; Antisense; ATACGCCTGTACAATCAACCGTTGG
>probe:Drosophila_2:1631068_a_at:138:489; Interrogation_Position=1814; Antisense; GTACGCTCTTTATCAAGCTCATCGT
>probe:Drosophila_2:1631068_a_at:282:43; Interrogation_Position=1834; Antisense; ATCGTCAAGCTCTTCATCCTGGTCA
>probe:Drosophila_2:1631068_a_at:367:45; Interrogation_Position=1849; Antisense; ATCCTGGTCATCGTGTACGACCTGC
>probe:Drosophila_2:1631068_a_at:433:403; Interrogation_Position=1913; Antisense; GACTCTTCACAATCTTCACGATCGC

Paste this into a BLAST search page for me
TAAGGCGCCCAAAGTACCGAAGGCAGGCACCAAGAGTACCGAAGGCACCAGCACCAAGAGTACCAAAGCCACCTAGCCGAAGCCGCCAAAGGTACCCAAGGCACCCAGGGTACCAAAAGCTCCAAGTACCGAAAGCACCAAGGCAACCGAGTAAAGGTACCGCTACCCATTGAGCATTGAGCCCGTACCTCTAGAAACACGAAACACCCACTTACATAAATCCTAATACGCCTGTACAATCAACCGTTGGGTACGCTCTTTATCAAGCTCATCGTATCGTCAAGCTCTTCATCCTGGTCAATCCTGGTCATCGTGTACGACCTGCGACTCTTCACAATCTTCACGATCGC

Full Affymetrix probeset data:

Annotations for 1631068_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720