FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1631090_a_at:

>probe:Drosophila_2:1631090_a_at:680:693; Interrogation_Position=1954; Antisense; TTTGAACATCGGTCATCAATCTCCC
>probe:Drosophila_2:1631090_a_at:435:209; Interrogation_Position=2018; Antisense; AAGCAAGCAGTTAGAAGCCCTCCCT
>probe:Drosophila_2:1631090_a_at:310:343; Interrogation_Position=2054; Antisense; GCTTCTGACCAGATCAATCCGGGAA
>probe:Drosophila_2:1631090_a_at:257:133; Interrogation_Position=2083; Antisense; ACCGCCATTGCTACCACGAAAGAAG
>probe:Drosophila_2:1631090_a_at:680:391; Interrogation_Position=2100; Antisense; GAAAGAAGGACCACGCTCATCTAAA
>probe:Drosophila_2:1631090_a_at:512:565; Interrogation_Position=2143; Antisense; GGCCTCCGTACCCTTGAGAAATTGG
>probe:Drosophila_2:1631090_a_at:285:213; Interrogation_Position=2203; Antisense; AAGAGGAACCCGACCGTATCAAGCA
>probe:Drosophila_2:1631090_a_at:268:331; Interrogation_Position=2233; Antisense; GCGGACATAACGCTATCATCGAAAT
>probe:Drosophila_2:1631090_a_at:644:289; Interrogation_Position=2267; Antisense; CGGACGCTCCGATTACGGACTTATA
>probe:Drosophila_2:1631090_a_at:619:477; Interrogation_Position=2292; Antisense; GTTTTAGCTATAAGCCGCCTCAAAA
>probe:Drosophila_2:1631090_a_at:644:515; Interrogation_Position=2345; Antisense; GTGTCACTCACTTATAGCATTTGGA
>probe:Drosophila_2:1631090_a_at:428:33; Interrogation_Position=2382; Antisense; ATCACATCAACGACACTTCATCTTA
>probe:Drosophila_2:1631090_a_at:352:199; Interrogation_Position=2425; Antisense; AACCCAATAACCTGTGCGTAAGCTC
>probe:Drosophila_2:1631090_a_at:358:369; Interrogation_Position=2464; Antisense; GAATGCTTTTACCAAGTGTCAACTG

Paste this into a BLAST search page for me
TTTGAACATCGGTCATCAATCTCCCAAGCAAGCAGTTAGAAGCCCTCCCTGCTTCTGACCAGATCAATCCGGGAAACCGCCATTGCTACCACGAAAGAAGGAAAGAAGGACCACGCTCATCTAAAGGCCTCCGTACCCTTGAGAAATTGGAAGAGGAACCCGACCGTATCAAGCAGCGGACATAACGCTATCATCGAAATCGGACGCTCCGATTACGGACTTATAGTTTTAGCTATAAGCCGCCTCAAAAGTGTCACTCACTTATAGCATTTGGAATCACATCAACGACACTTCATCTTAAACCCAATAACCTGTGCGTAAGCTCGAATGCTTTTACCAAGTGTCAACTG

Full Affymetrix probeset data:

Annotations for 1631090_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720