FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1631118_s_at:

>probe:Drosophila_2:1631118_s_at:454:147; Interrogation_Position=1432; Antisense; ACTACTCCATGTTATTGTTACGTTA
>probe:Drosophila_2:1631118_s_at:471:477; Interrogation_Position=1458; Antisense; GTTTTCTTATTCATTTTGTCCCATT
>probe:Drosophila_2:1631118_s_at:385:503; Interrogation_Position=1475; Antisense; GTCCCATTATCTATCTATCCATTTC
>probe:Drosophila_2:1631118_s_at:437:45; Interrogation_Position=1491; Antisense; ATCCATTTCCAGTCAAGGGTTCTTA
>probe:Drosophila_2:1631118_s_at:334:221; Interrogation_Position=1598; Antisense; AAGTGCAAGCCTAGCTAGCCAGCCA
>probe:Drosophila_2:1631118_s_at:532:313; Interrogation_Position=1619; Antisense; GCCAGCCCAGCCGAATATTCAAAAT
>probe:Drosophila_2:1631118_s_at:48:685; Interrogation_Position=1634; Antisense; TATTCAAAATGTCTCGGTATCGCGT
>probe:Drosophila_2:1631118_s_at:330:707; Interrogation_Position=1740; Antisense; TTACGTGTACGTGACTTTGATTATA
>probe:Drosophila_2:1631118_s_at:548:31; Interrogation_Position=1788; Antisense; ATAACCGTCTGTGTATGTATGGCAT
>probe:Drosophila_2:1631118_s_at:25:263; Interrogation_Position=1834; Antisense; CAGCCAGTTCACGTTAGCATTAATC
>probe:Drosophila_2:1631118_s_at:686:641; Interrogation_Position=1857; Antisense; TCTGCGCAAGATTCAGTGTTGTTTA
>probe:Drosophila_2:1631118_s_at:434:685; Interrogation_Position=1880; Antisense; TATAACTTTTATTTGCTGATTCTGC
>probe:Drosophila_2:1631118_s_at:509:11; Interrogation_Position=1898; Antisense; ATTCTGCAAGCGATATACCATTTTA
>probe:Drosophila_2:1631118_s_at:129:131; Interrogation_Position=1922; Antisense; ACCGTATAGCATATTTGTAGTCCAT

Paste this into a BLAST search page for me
ACTACTCCATGTTATTGTTACGTTAGTTTTCTTATTCATTTTGTCCCATTGTCCCATTATCTATCTATCCATTTCATCCATTTCCAGTCAAGGGTTCTTAAAGTGCAAGCCTAGCTAGCCAGCCAGCCAGCCCAGCCGAATATTCAAAATTATTCAAAATGTCTCGGTATCGCGTTTACGTGTACGTGACTTTGATTATAATAACCGTCTGTGTATGTATGGCATCAGCCAGTTCACGTTAGCATTAATCTCTGCGCAAGATTCAGTGTTGTTTATATAACTTTTATTTGCTGATTCTGCATTCTGCAAGCGATATACCATTTTAACCGTATAGCATATTTGTAGTCCAT

Full Affymetrix probeset data:

Annotations for 1631118_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720