FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1631131_a_at:

>probe:Drosophila_2:1631131_a_at:202:239; Interrogation_Position=3153; Antisense; AATCTCATCATATACAGCTGCTCCA
>probe:Drosophila_2:1631131_a_at:378:333; Interrogation_Position=3172; Antisense; GCTCCAAAACAGGTGGTGATTTCTC
>probe:Drosophila_2:1631131_a_at:145:19; Interrogation_Position=3190; Antisense; ATTTCTCTGACATGGAACGCTCACG
>probe:Drosophila_2:1631131_a_at:502:199; Interrogation_Position=3205; Antisense; AACGCTCACGGGAGGCAGAGATCCT
>probe:Drosophila_2:1631131_a_at:246:35; Interrogation_Position=3235; Antisense; ATCAGCGCCGTCTCACAGTGGCTAT
>probe:Drosophila_2:1631131_a_at:219:267; Interrogation_Position=3250; Antisense; CAGTGGCTATTACCCGTGCCAAGAA
>probe:Drosophila_2:1631131_a_at:671:219; Interrogation_Position=3300; Antisense; AAGTGCCTGGAGCAATACGGTCCCT
>probe:Drosophila_2:1631131_a_at:586:503; Interrogation_Position=3319; Antisense; GTCCCTTCCGTCAGCTTTTTAAGCA
>probe:Drosophila_2:1631131_a_at:264:341; Interrogation_Position=3332; Antisense; GCTTTTTAAGCACATTCCGGACAGG
>probe:Drosophila_2:1631131_a_at:14:155; Interrogation_Position=3352; Antisense; ACAGGTGTCGGCTCAAGTTGGAAGA
>probe:Drosophila_2:1631131_a_at:22:575; Interrogation_Position=3393; Antisense; GGCTGGCAGCGCATCCAAGAGGATT
>probe:Drosophila_2:1631131_a_at:393:467; Interrogation_Position=3420; Antisense; GTTGGTCTAATGGACACCTAGGTAA
>probe:Drosophila_2:1631131_a_at:112:479; Interrogation_Position=3611; Antisense; GTTTAACACATTCTTGCTACTACAA
>probe:Drosophila_2:1631131_a_at:13:147; Interrogation_Position=3670; Antisense; ACTCACTAAATCCTCACTTAAGACC

Paste this into a BLAST search page for me
AATCTCATCATATACAGCTGCTCCAGCTCCAAAACAGGTGGTGATTTCTCATTTCTCTGACATGGAACGCTCACGAACGCTCACGGGAGGCAGAGATCCTATCAGCGCCGTCTCACAGTGGCTATCAGTGGCTATTACCCGTGCCAAGAAAAGTGCCTGGAGCAATACGGTCCCTGTCCCTTCCGTCAGCTTTTTAAGCAGCTTTTTAAGCACATTCCGGACAGGACAGGTGTCGGCTCAAGTTGGAAGAGGCTGGCAGCGCATCCAAGAGGATTGTTGGTCTAATGGACACCTAGGTAAGTTTAACACATTCTTGCTACTACAAACTCACTAAATCCTCACTTAAGACC

Full Affymetrix probeset data:

Annotations for 1631131_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720