FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1631304_a_at:

>probe:Drosophila_2:1631304_a_at:276:515; Interrogation_Position=1459; Antisense; GTGTACCTTTTGAACTGTCTGCATC
>probe:Drosophila_2:1631304_a_at:363:173; Interrogation_Position=1490; Antisense; AAAGCTCGCTGGCTGTCTACGAATA
>probe:Drosophila_2:1631304_a_at:718:323; Interrogation_Position=1543; Antisense; GCGCAGTCGGATGCCCAGTTGGACA
>probe:Drosophila_2:1631304_a_at:224:95; Interrogation_Position=1559; Antisense; AGTTGGACACACTGACCTCCGAGCA
>probe:Drosophila_2:1631304_a_at:215:521; Interrogation_Position=1597; Antisense; GTGGCGAACCTCAATCTGGGTCCCA
>probe:Drosophila_2:1631304_a_at:121:39; Interrogation_Position=1621; Antisense; ATCTACGCCATTCTGCAGAGCAATC
>probe:Drosophila_2:1631304_a_at:133:99; Interrogation_Position=1688; Antisense; AGATGGACGCCTTTCTGGAACTACC
>probe:Drosophila_2:1631304_a_at:645:559; Interrogation_Position=1704; Antisense; GGAACTACCCGATGTATTGCTCCTG
>probe:Drosophila_2:1631304_a_at:368:533; Interrogation_Position=1734; Antisense; GGTGCAGCTCATAATGTCCAGCAGT
>probe:Drosophila_2:1631304_a_at:120:473; Interrogation_Position=1771; Antisense; GTTCAGAAGCGATCCTTCAACGTGA
>probe:Drosophila_2:1631304_a_at:455:513; Interrogation_Position=1792; Antisense; GTGATCGTGGCCATCTACAAGCAGA
>probe:Drosophila_2:1631304_a_at:645:663; Interrogation_Position=1807; Antisense; TACAAGCAGATCTACGAACGCGTCC
>probe:Drosophila_2:1631304_a_at:364:113; Interrogation_Position=1862; Antisense; AGCAGCTGCTGCACAGAACGCCGGA
>probe:Drosophila_2:1631304_a_at:114:153; Interrogation_Position=1898; Antisense; ACATCCTGACCTCCACTTAGTGGAT

Paste this into a BLAST search page for me
GTGTACCTTTTGAACTGTCTGCATCAAAGCTCGCTGGCTGTCTACGAATAGCGCAGTCGGATGCCCAGTTGGACAAGTTGGACACACTGACCTCCGAGCAGTGGCGAACCTCAATCTGGGTCCCAATCTACGCCATTCTGCAGAGCAATCAGATGGACGCCTTTCTGGAACTACCGGAACTACCCGATGTATTGCTCCTGGGTGCAGCTCATAATGTCCAGCAGTGTTCAGAAGCGATCCTTCAACGTGAGTGATCGTGGCCATCTACAAGCAGATACAAGCAGATCTACGAACGCGTCCAGCAGCTGCTGCACAGAACGCCGGAACATCCTGACCTCCACTTAGTGGAT

Full Affymetrix probeset data:

Annotations for 1631304_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720