FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1631417_s_at:

>probe:Drosophila_2:1631417_s_at:206:239; Interrogation_Position=2728; Antisense; AATAACTAATGTGCCTCTTATGTGC
>probe:Drosophila_2:1631417_s_at:669:303; Interrogation_Position=2763; Antisense; CCTAGATTGTTGCACTCCTTCAAAG
>probe:Drosophila_2:1631417_s_at:387:469; Interrogation_Position=2771; Antisense; GTTGCACTCCTTCAAAGTTTACGCT
>probe:Drosophila_2:1631417_s_at:600:475; Interrogation_Position=2787; Antisense; GTTTACGCTAGTCTCTGTTGAATCC
>probe:Drosophila_2:1631417_s_at:551:151; Interrogation_Position=2876; Antisense; ACATATATCTATTTCTCAACTGCAT
>probe:Drosophila_2:1631417_s_at:183:195; Interrogation_Position=2893; Antisense; AACTGCATACTTTCGCATTAAACCG
>probe:Drosophila_2:1631417_s_at:54:117; Interrogation_Position=2975; Antisense; ACTAAAACATATCCCGAGGCAACGG
>probe:Drosophila_2:1631417_s_at:155:437; Interrogation_Position=2990; Antisense; GAGGCAACGGCAACCCAACCAAAGG
>probe:Drosophila_2:1631417_s_at:217:437; Interrogation_Position=3065; Antisense; GAGGACGTTCGATAGCCAATGTTAT
>probe:Drosophila_2:1631417_s_at:274:61; Interrogation_Position=3107; Antisense; ATGTATGTATATCTGCTCACTGTAG
>probe:Drosophila_2:1631417_s_at:248:373; Interrogation_Position=3157; Antisense; GAAGTTACCACAAATGTTGCCCCAT
>probe:Drosophila_2:1631417_s_at:491:469; Interrogation_Position=3172; Antisense; GTTGCCCCATTAGTGTACGTATACG
>probe:Drosophila_2:1631417_s_at:6:483; Interrogation_Position=3190; Antisense; GTATACGTGACGTGTCTGTGTCTAG
>probe:Drosophila_2:1631417_s_at:468:499; Interrogation_Position=3203; Antisense; GTCTGTGTCTAGTTGGTGTCTCAAA

Paste this into a BLAST search page for me
AATAACTAATGTGCCTCTTATGTGCCCTAGATTGTTGCACTCCTTCAAAGGTTGCACTCCTTCAAAGTTTACGCTGTTTACGCTAGTCTCTGTTGAATCCACATATATCTATTTCTCAACTGCATAACTGCATACTTTCGCATTAAACCGACTAAAACATATCCCGAGGCAACGGGAGGCAACGGCAACCCAACCAAAGGGAGGACGTTCGATAGCCAATGTTATATGTATGTATATCTGCTCACTGTAGGAAGTTACCACAAATGTTGCCCCATGTTGCCCCATTAGTGTACGTATACGGTATACGTGACGTGTCTGTGTCTAGGTCTGTGTCTAGTTGGTGTCTCAAA

Full Affymetrix probeset data:

Annotations for 1631417_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720