FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1631454_a_at:

>probe:Drosophila_2:1631454_a_at:352:545; Interrogation_Position=546; Antisense; GGATCAAGTGCCTCTCCGGATCGAT
>probe:Drosophila_2:1631454_a_at:423:305; Interrogation_Position=561; Antisense; CCGGATCGATGCTGATCACCATTAA
>probe:Drosophila_2:1631454_a_at:557:603; Interrogation_Position=573; Antisense; TGATCACCATTAAAGACGCTCCTCC
>probe:Drosophila_2:1631454_a_at:624:661; Interrogation_Position=583; Antisense; TAAAGACGCTCCTCCGAACCACGAA
>probe:Drosophila_2:1631454_a_at:450:391; Interrogation_Position=605; Antisense; GAAACGGGCCTGTTCAGCGGCATGA
>probe:Drosophila_2:1631454_a_at:102:603; Interrogation_Position=615; Antisense; TGTTCAGCGGCATGATCTACCCGAA
>probe:Drosophila_2:1631454_a_at:321:603; Interrogation_Position=627; Antisense; TGATCTACCCGAAAGGCCTGTCCAA
>probe:Drosophila_2:1631454_a_at:728:391; Interrogation_Position=637; Antisense; GAAAGGCCTGTCCAAGAACTCCACC
>probe:Drosophila_2:1631454_a_at:433:107; Interrogation_Position=651; Antisense; AGAACTCCACCTGCTTGAGCGAGTA
>probe:Drosophila_2:1631454_a_at:549:89; Interrogation_Position=672; Antisense; AGTACAGAGATCATGTGGGCTCCCT
>probe:Drosophila_2:1631454_a_at:255:63; Interrogation_Position=684; Antisense; ATGTGGGCTCCCTGCGATATAAGCT
>probe:Drosophila_2:1631454_a_at:437:283; Interrogation_Position=695; Antisense; CTGCGATATAAGCTGCCCCTGAGAT
>probe:Drosophila_2:1631454_a_at:613:31; Interrogation_Position=702; Antisense; ATAAGCTGCCCCTGAGATCTTGCAA
>probe:Drosophila_2:1631454_a_at:51:427; Interrogation_Position=715; Antisense; GAGATCTTGCAACACGATGCCGAAG

Paste this into a BLAST search page for me
GGATCAAGTGCCTCTCCGGATCGATCCGGATCGATGCTGATCACCATTAATGATCACCATTAAAGACGCTCCTCCTAAAGACGCTCCTCCGAACCACGAAGAAACGGGCCTGTTCAGCGGCATGATGTTCAGCGGCATGATCTACCCGAATGATCTACCCGAAAGGCCTGTCCAAGAAAGGCCTGTCCAAGAACTCCACCAGAACTCCACCTGCTTGAGCGAGTAAGTACAGAGATCATGTGGGCTCCCTATGTGGGCTCCCTGCGATATAAGCTCTGCGATATAAGCTGCCCCTGAGATATAAGCTGCCCCTGAGATCTTGCAAGAGATCTTGCAACACGATGCCGAAG

Full Affymetrix probeset data:

Annotations for 1631454_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720