FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1631463_a_at:

>probe:Drosophila_2:1631463_a_at:254:475; Interrogation_Position=1009; Antisense; GTTATCGTCCCACATTTCGGAAATT
>probe:Drosophila_2:1631463_a_at:101:167; Interrogation_Position=1107; Antisense; AAATGTTTCTCTTGGGCGTAATCTC
>probe:Drosophila_2:1631463_a_at:662:277; Interrogation_Position=1197; Antisense; CTATGCTATGCCAAAGTGTCTGACA
>probe:Drosophila_2:1631463_a_at:255:191; Interrogation_Position=1228; Antisense; AACATTTGCGCATTCTTTGACCAAG
>probe:Drosophila_2:1631463_a_at:298:351; Interrogation_Position=1283; Antisense; GCAGACCATTTGTTTCAGATTCGGA
>probe:Drosophila_2:1631463_a_at:567:463; Interrogation_Position=1300; Antisense; GATTCGGAGATTTTTTGCTGCCAAA
>probe:Drosophila_2:1631463_a_at:41:117; Interrogation_Position=1370; Antisense; AGCATTGCAATCTGTTAGGCCTCAA
>probe:Drosophila_2:1631463_a_at:389:233; Interrogation_Position=1407; Antisense; AATGCTGCACCTTTGATGTTGTCTC
>probe:Drosophila_2:1631463_a_at:156:687; Interrogation_Position=887; Antisense; TATACTTTCCCTGCAATACGCTATT
>probe:Drosophila_2:1631463_a_at:223:363; Interrogation_Position=899; Antisense; GCAATACGCTATTCGCCTTAGATGT
>probe:Drosophila_2:1631463_a_at:467:705; Interrogation_Position=916; Antisense; TTAGATGTATCTGGGTGGCTGCTCC
>probe:Drosophila_2:1631463_a_at:541:173; Interrogation_Position=944; Antisense; AAAGCCCGGGAATATGCAACCAGTT
>probe:Drosophila_2:1631463_a_at:684:357; Interrogation_Position=959; Antisense; GCAACCAGTTACATTTGAGGCCATT
>probe:Drosophila_2:1631463_a_at:55:579; Interrogation_Position=977; Antisense; GGCCATTTGGGCTTAAGCGTATTCC

Paste this into a BLAST search page for me
GTTATCGTCCCACATTTCGGAAATTAAATGTTTCTCTTGGGCGTAATCTCCTATGCTATGCCAAAGTGTCTGACAAACATTTGCGCATTCTTTGACCAAGGCAGACCATTTGTTTCAGATTCGGAGATTCGGAGATTTTTTGCTGCCAAAAGCATTGCAATCTGTTAGGCCTCAAAATGCTGCACCTTTGATGTTGTCTCTATACTTTCCCTGCAATACGCTATTGCAATACGCTATTCGCCTTAGATGTTTAGATGTATCTGGGTGGCTGCTCCAAAGCCCGGGAATATGCAACCAGTTGCAACCAGTTACATTTGAGGCCATTGGCCATTTGGGCTTAAGCGTATTCC

Full Affymetrix probeset data:

Annotations for 1631463_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720