FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1631468_a_at:

>probe:Drosophila_2:1631468_a_at:557:439; Interrogation_Position=2476; Antisense; GAGGCGTTTCAATCCCAGCATTCAT
>probe:Drosophila_2:1631468_a_at:578:263; Interrogation_Position=2491; Antisense; CAGCATTCATTCCAAGCAGTATCTT
>probe:Drosophila_2:1631468_a_at:69:641; Interrogation_Position=2521; Antisense; TCTGGTGGTTACCAATCACATCCTC
>probe:Drosophila_2:1631468_a_at:337:669; Interrogation_Position=2547; Antisense; TACTCATTCTGGACAGTTCGGCCAA
>probe:Drosophila_2:1631468_a_at:419:533; Interrogation_Position=2576; Antisense; GGTGGATGTCAAACCATTCGCCTGT
>probe:Drosophila_2:1631468_a_at:398:9; Interrogation_Position=2591; Antisense; ATTCGCCTGTCGGAGCACATAACAC
>probe:Drosophila_2:1631468_a_at:207:31; Interrogation_Position=2609; Antisense; ATAACACAGTTTGCCACGCTGGAGG
>probe:Drosophila_2:1631468_a_at:465:681; Interrogation_Position=2645; Antisense; TATGGCATTCTGTTGGAGGACTTCA
>probe:Drosophila_2:1631468_a_at:19:495; Interrogation_Position=2687; Antisense; GTCAATGACTGCATCTTCACCATGA
>probe:Drosophila_2:1631468_a_at:118:153; Interrogation_Position=2718; Antisense; ACATCGGTGGCGATCTGGGCCAGAT
>probe:Drosophila_2:1631468_a_at:518:613; Interrogation_Position=2803; Antisense; TGAACTGTGCGATGACTGGTCTGAT
>probe:Drosophila_2:1631468_a_at:108:473; Interrogation_Position=2851; Antisense; GTTCATGAATACTCCTCCGAAGTCG
>probe:Drosophila_2:1631468_a_at:498:261; Interrogation_Position=2884; Antisense; CATTCCTACAACTTCCTTGACGGAA
>probe:Drosophila_2:1631468_a_at:279:387; Interrogation_Position=2918; Antisense; GAACACAACCAGGAGCATACCGTTT

Paste this into a BLAST search page for me
GAGGCGTTTCAATCCCAGCATTCATCAGCATTCATTCCAAGCAGTATCTTTCTGGTGGTTACCAATCACATCCTCTACTCATTCTGGACAGTTCGGCCAAGGTGGATGTCAAACCATTCGCCTGTATTCGCCTGTCGGAGCACATAACACATAACACAGTTTGCCACGCTGGAGGTATGGCATTCTGTTGGAGGACTTCAGTCAATGACTGCATCTTCACCATGAACATCGGTGGCGATCTGGGCCAGATTGAACTGTGCGATGACTGGTCTGATGTTCATGAATACTCCTCCGAAGTCGCATTCCTACAACTTCCTTGACGGAAGAACACAACCAGGAGCATACCGTTT

Full Affymetrix probeset data:

Annotations for 1631468_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720