FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1631474_s_at:

>probe:Drosophila_2:1631474_s_at:418:461; Interrogation_Position=1885; Antisense; GATTAAGCACGCCACTGAGTTCCTG
>probe:Drosophila_2:1631474_s_at:554:427; Interrogation_Position=1901; Antisense; GAGTTCCTGGCCAACGAGATGGGAC
>probe:Drosophila_2:1631474_s_at:138:427; Interrogation_Position=1916; Antisense; GAGATGGGACACTCGGTCAACCGCA
>probe:Drosophila_2:1631474_s_at:425:225; Interrogation_Position=1946; Antisense; AAGGAGCGCATACCCATCAAGCTGT
>probe:Drosophila_2:1631474_s_at:429:105; Interrogation_Position=1986; Antisense; AGACATACATCAAGCGCTTCCAGCT
>probe:Drosophila_2:1631474_s_at:86:373; Interrogation_Position=2026; Antisense; GAAGGGCTACGTTTCCATCAACGAT
>probe:Drosophila_2:1631474_s_at:410:413; Interrogation_Position=2068; Antisense; GAGCTTCGGCGATGGCGACGTCTCT
>probe:Drosophila_2:1631474_s_at:415:119; Interrogation_Position=2100; Antisense; AGCTGCACGAAATCCTGCGCGAGAT
>probe:Drosophila_2:1631474_s_at:172:449; Interrogation_Position=2122; Antisense; GATCGATACCAACATGAACGGCCAG
>probe:Drosophila_2:1631474_s_at:477:241; Interrogation_Position=2160; Antisense; AATACCTTCAGATGATGTCGGCCAT
>probe:Drosophila_2:1631474_s_at:516:1; Interrogation_Position=2183; Antisense; ATCAAAACGGGCGACGTGGCCTACT
>probe:Drosophila_2:1631474_s_at:402:113; Interrogation_Position=2238; Antisense; AGCAGAAGCACGAGGCGGCCAATCT
>probe:Drosophila_2:1631474_s_at:560:265; Interrogation_Position=2267; Antisense; CAGATCAGCGTGGACCGATCCGGAG
>probe:Drosophila_2:1631474_s_at:11:571; Interrogation_Position=2294; Antisense; GGCTTGTAAGAGCACCAGCGACTTA

Paste this into a BLAST search page for me
GATTAAGCACGCCACTGAGTTCCTGGAGTTCCTGGCCAACGAGATGGGACGAGATGGGACACTCGGTCAACCGCAAAGGAGCGCATACCCATCAAGCTGTAGACATACATCAAGCGCTTCCAGCTGAAGGGCTACGTTTCCATCAACGATGAGCTTCGGCGATGGCGACGTCTCTAGCTGCACGAAATCCTGCGCGAGATGATCGATACCAACATGAACGGCCAGAATACCTTCAGATGATGTCGGCCATATCAAAACGGGCGACGTGGCCTACTAGCAGAAGCACGAGGCGGCCAATCTCAGATCAGCGTGGACCGATCCGGAGGGCTTGTAAGAGCACCAGCGACTTA

Full Affymetrix probeset data:

Annotations for 1631474_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720