FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1631499_a_at:

>probe:Drosophila_2:1631499_a_at:177:665; Interrogation_Position=4810; Antisense; TACAATGCAAATTCGAAGCGTGGCT
>probe:Drosophila_2:1631499_a_at:334:379; Interrogation_Position=4824; Antisense; GAAGCGTGGCTATATACTCAACAAG
>probe:Drosophila_2:1631499_a_at:697:183; Interrogation_Position=4856; Antisense; AACAAGCCGAGGACGAGGTGCCTTT
>probe:Drosophila_2:1631499_a_at:500:409; Interrogation_Position=4867; Antisense; GACGAGGTGCCTTTCGCTTGCCAGA
>probe:Drosophila_2:1631499_a_at:670:171; Interrogation_Position=4938; Antisense; AAAGCAACCGCAACTACTCAATCAT
>probe:Drosophila_2:1631499_a_at:634:401; Interrogation_Position=5039; Antisense; GACTTAGGCTTAGCTTAGCGTATGA
>probe:Drosophila_2:1631499_a_at:371:177; Interrogation_Position=5063; Antisense; AAACGATTAACCCACAATCCTGCAT
>probe:Drosophila_2:1631499_a_at:82:131; Interrogation_Position=5104; Antisense; ACCTAACCAATCCACACACATTGTA
>probe:Drosophila_2:1631499_a_at:571:565; Interrogation_Position=5135; Antisense; GGCACAAGAAGTCCACAAACTTTGT
>probe:Drosophila_2:1631499_a_at:382:377; Interrogation_Position=5187; Antisense; GAAGCAACCGATATTGTAGTACCGA
>probe:Drosophila_2:1631499_a_at:288:485; Interrogation_Position=5202; Antisense; GTAGTACCGAAATTGAGACTCCTTC
>probe:Drosophila_2:1631499_a_at:533:723; Interrogation_Position=5214; Antisense; TTGAGACTCCTTCGCAATGAATCCC
>probe:Drosophila_2:1631499_a_at:317:245; Interrogation_Position=5250; Antisense; AATTTAGCCCCAAAATTGCCGCACA
>probe:Drosophila_2:1631499_a_at:643:257; Interrogation_Position=5271; Antisense; CACACTCGTGTAGTCTCTCTATTAT

Paste this into a BLAST search page for me
TACAATGCAAATTCGAAGCGTGGCTGAAGCGTGGCTATATACTCAACAAGAACAAGCCGAGGACGAGGTGCCTTTGACGAGGTGCCTTTCGCTTGCCAGAAAAGCAACCGCAACTACTCAATCATGACTTAGGCTTAGCTTAGCGTATGAAAACGATTAACCCACAATCCTGCATACCTAACCAATCCACACACATTGTAGGCACAAGAAGTCCACAAACTTTGTGAAGCAACCGATATTGTAGTACCGAGTAGTACCGAAATTGAGACTCCTTCTTGAGACTCCTTCGCAATGAATCCCAATTTAGCCCCAAAATTGCCGCACACACACTCGTGTAGTCTCTCTATTAT

Full Affymetrix probeset data:

Annotations for 1631499_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720