FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1631561_s_at:

>probe:Drosophila_2:1631561_s_at:190:417; Interrogation_Position=2041; Antisense; GAGCGCTGGCAGACTGGCAAGTTCT
>probe:Drosophila_2:1631561_s_at:98:321; Interrogation_Position=2069; Antisense; GCCGCCTCACAATTGTCAATCTGAA
>probe:Drosophila_2:1631561_s_at:390:519; Interrogation_Position=2098; Antisense; GTGGAGCTGCACGAAGTGTTCCTAA
>probe:Drosophila_2:1631561_s_at:434:657; Interrogation_Position=2234; Antisense; TAACGAGTTCCATTGACATTTTCAT
>probe:Drosophila_2:1631561_s_at:239:343; Interrogation_Position=2286; Antisense; GCTTGTGGAACACGCATTTCCATAT
>probe:Drosophila_2:1631561_s_at:604:717; Interrogation_Position=2303; Antisense; TTCCATATAGAAATCGGGTCGGGTT
>probe:Drosophila_2:1631561_s_at:132:291; Interrogation_Position=2317; Antisense; CGGGTCGGGTTTTTCAATCTGTGAT
>probe:Drosophila_2:1631561_s_at:219:641; Interrogation_Position=2334; Antisense; TCTGTGATGTGTTAAGTACTTAGCC
>probe:Drosophila_2:1631561_s_at:537:89; Interrogation_Position=2348; Antisense; AGTACTTAGCCTTGGCAGCCATGGA
>probe:Drosophila_2:1631561_s_at:115:219; Interrogation_Position=2419; Antisense; AAGTCAATTGAAGTGCATGTCGCGT
>probe:Drosophila_2:1631561_s_at:581:501; Interrogation_Position=2437; Antisense; GTCGCGTTGAAAATGGTGCAGTGCA
>probe:Drosophila_2:1631561_s_at:77:619; Interrogation_Position=2453; Antisense; TGCAGTGCATATTGGTGAGGTGACA
>probe:Drosophila_2:1631561_s_at:280:377; Interrogation_Position=2480; Antisense; GAAGCTTCTGACATCTTTATATACA
>probe:Drosophila_2:1631561_s_at:250:687; Interrogation_Position=2530; Antisense; TATATTTCTTACATTTACGCCTTGT

Paste this into a BLAST search page for me
GAGCGCTGGCAGACTGGCAAGTTCTGCCGCCTCACAATTGTCAATCTGAAGTGGAGCTGCACGAAGTGTTCCTAATAACGAGTTCCATTGACATTTTCATGCTTGTGGAACACGCATTTCCATATTTCCATATAGAAATCGGGTCGGGTTCGGGTCGGGTTTTTCAATCTGTGATTCTGTGATGTGTTAAGTACTTAGCCAGTACTTAGCCTTGGCAGCCATGGAAAGTCAATTGAAGTGCATGTCGCGTGTCGCGTTGAAAATGGTGCAGTGCATGCAGTGCATATTGGTGAGGTGACAGAAGCTTCTGACATCTTTATATACATATATTTCTTACATTTACGCCTTGT

Full Affymetrix probeset data:

Annotations for 1631561_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720