FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1631565_a_at:

>probe:Drosophila_2:1631565_a_at:453:107; Interrogation_Position=1360; Antisense; AGAAAACGAGCAGCTTCGTCGCACT
>probe:Drosophila_2:1631565_a_at:683:501; Interrogation_Position=1377; Antisense; GTCGCACTCTGCAGGAGCGGCACAA
>probe:Drosophila_2:1631565_a_at:354:395; Interrogation_Position=1403; Antisense; GAAATGCGCTATCTGCGCCAGCTGA
>probe:Drosophila_2:1631565_a_at:181:323; Interrogation_Position=1417; Antisense; GCGCCAGCTGATTCGAGAGTTCTAC
>probe:Drosophila_2:1631565_a_at:460:429; Interrogation_Position=1433; Antisense; GAGTTCTACCATGAACGCAAGCGCT
>probe:Drosophila_2:1631565_a_at:679:121; Interrogation_Position=1452; Antisense; AGCGCTAGGCTTTATTTTCTTTGAA
>probe:Drosophila_2:1631565_a_at:387:673; Interrogation_Position=1509; Antisense; TATAGTTAAACCCAAGCCTCTTCCA
>probe:Drosophila_2:1631565_a_at:239:31; Interrogation_Position=1571; Antisense; ATCAATAACAATCTCCGGGTTGCCC
>probe:Drosophila_2:1631565_a_at:161:165; Interrogation_Position=1605; Antisense; AAATCACCAAAGTACGCAGCCTGTC
>probe:Drosophila_2:1631565_a_at:42:703; Interrogation_Position=1643; Antisense; TTTTGGCACTAATGACGAGTCTCTG
>probe:Drosophila_2:1631565_a_at:500:45; Interrogation_Position=1713; Antisense; ATCCCAAGCAGCACGGTCCAATGTA
>probe:Drosophila_2:1631565_a_at:448:207; Interrogation_Position=1755; Antisense; AAGCTCATTGATTTGTTTTTCTGCA
>probe:Drosophila_2:1631565_a_at:390:255; Interrogation_Position=1778; Antisense; CAAATCGGACAGTGTTGCGGCTGCT
>probe:Drosophila_2:1631565_a_at:271:623; Interrogation_Position=1793; Antisense; TGCGGCTGCTGTGCTATTTCAAAAA

Paste this into a BLAST search page for me
AGAAAACGAGCAGCTTCGTCGCACTGTCGCACTCTGCAGGAGCGGCACAAGAAATGCGCTATCTGCGCCAGCTGAGCGCCAGCTGATTCGAGAGTTCTACGAGTTCTACCATGAACGCAAGCGCTAGCGCTAGGCTTTATTTTCTTTGAATATAGTTAAACCCAAGCCTCTTCCAATCAATAACAATCTCCGGGTTGCCCAAATCACCAAAGTACGCAGCCTGTCTTTTGGCACTAATGACGAGTCTCTGATCCCAAGCAGCACGGTCCAATGTAAAGCTCATTGATTTGTTTTTCTGCACAAATCGGACAGTGTTGCGGCTGCTTGCGGCTGCTGTGCTATTTCAAAAA

Full Affymetrix probeset data:

Annotations for 1631565_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720