FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1631594_s_at:

>probe:Drosophila_2:1631594_s_at:187:277; Interrogation_Position=3809; Antisense; CTATGTGTTCACTATGTTAGGCCGA
>probe:Drosophila_2:1631594_s_at:486:473; Interrogation_Position=3824; Antisense; GTTAGGCCGAGAACTACCCAATCGA
>probe:Drosophila_2:1631594_s_at:413:201; Interrogation_Position=3850; Antisense; AACCCCTCGATCCATAGCTGATAGT
>probe:Drosophila_2:1631594_s_at:478:675; Interrogation_Position=3864; Antisense; TAGCTGATAGTGTCGCTCCCACAAG
>probe:Drosophila_2:1631594_s_at:230:335; Interrogation_Position=3890; Antisense; GCTCCAATATATACACCTTACTCTT
>probe:Drosophila_2:1631594_s_at:597:691; Interrogation_Position=3917; Antisense; TTTGTACATTTCACGTTCACCCATT
>probe:Drosophila_2:1631594_s_at:526:137; Interrogation_Position=3929; Antisense; ACGTTCACCCATTCTTGTAACTGTA
>probe:Drosophila_2:1631594_s_at:429:661; Interrogation_Position=3946; Antisense; TAACTGTAATCATTTATCGCCCCGC
>probe:Drosophila_2:1631594_s_at:558:257; Interrogation_Position=4055; Antisense; CACATTGGCGCATGAACGTGCAAAA
>probe:Drosophila_2:1631594_s_at:656:197; Interrogation_Position=4137; Antisense; AACGATTTTCTATCCCTACATTACG
>probe:Drosophila_2:1631594_s_at:489:517; Interrogation_Position=4185; Antisense; GTGTGCTTTTGTACCAGCAACCAAT
>probe:Drosophila_2:1631594_s_at:92:145; Interrogation_Position=4212; Antisense; ACATTATCGTGTTTCCCGGTTTCAT
>probe:Drosophila_2:1631594_s_at:285:15; Interrogation_Position=4366; Antisense; ATTATGTGCTTCTACGTTTACGATA
>probe:Drosophila_2:1631594_s_at:362:669; Interrogation_Position=4384; Antisense; TACGATAGACCGCATTCGTCTCAAT

Paste this into a BLAST search page for me
CTATGTGTTCACTATGTTAGGCCGAGTTAGGCCGAGAACTACCCAATCGAAACCCCTCGATCCATAGCTGATAGTTAGCTGATAGTGTCGCTCCCACAAGGCTCCAATATATACACCTTACTCTTTTTGTACATTTCACGTTCACCCATTACGTTCACCCATTCTTGTAACTGTATAACTGTAATCATTTATCGCCCCGCCACATTGGCGCATGAACGTGCAAAAAACGATTTTCTATCCCTACATTACGGTGTGCTTTTGTACCAGCAACCAATACATTATCGTGTTTCCCGGTTTCATATTATGTGCTTCTACGTTTACGATATACGATAGACCGCATTCGTCTCAAT

Full Affymetrix probeset data:

Annotations for 1631594_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720