FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1631618_s_at:

>probe:Drosophila_2:1631618_s_at:449:427; Interrogation_Position=1969; Antisense; GAGATCGATGACACCAGCCAGGAGG
>probe:Drosophila_2:1631618_s_at:332:95; Interrogation_Position=2006; Antisense; AGATTGGGCCCATTCAGGAGCCGTA
>probe:Drosophila_2:1631618_s_at:323:647; Interrogation_Position=2019; Antisense; TCAGGAGCCGTAAACACCTTTATTT
>probe:Drosophila_2:1631618_s_at:192:231; Interrogation_Position=2090; Antisense; AATGTAGATGTAATCCTGCCCTGCT
>probe:Drosophila_2:1631618_s_at:270:275; Interrogation_Position=2113; Antisense; CTTTCCCTTTTATATCCCAACAGAT
>probe:Drosophila_2:1631618_s_at:203:255; Interrogation_Position=2130; Antisense; CAACAGATCCCAATACTTTCCAATA
>probe:Drosophila_2:1631618_s_at:315:31; Interrogation_Position=2152; Antisense; ATAAGGCAAGCAGTGGTAGCTCCCC
>probe:Drosophila_2:1631618_s_at:425:559; Interrogation_Position=2201; Antisense; GGACACGATCCAACACTAGACTCTG
>probe:Drosophila_2:1631618_s_at:445:145; Interrogation_Position=2215; Antisense; ACTAGACTCTGTTGGCGGTTCGGTG
>probe:Drosophila_2:1631618_s_at:9:473; Interrogation_Position=2232; Antisense; GTTCGGTGTTTCATGCTCTGTGGCC
>probe:Drosophila_2:1631618_s_at:185:593; Interrogation_Position=2250; Antisense; TGTGGCCTCCCCTTTTGTTTTGTAT
>probe:Drosophila_2:1631618_s_at:174:483; Interrogation_Position=2271; Antisense; GTATTTATGTTGTGCTGTCCACCCC
>probe:Drosophila_2:1631618_s_at:689:675; Interrogation_Position=2362; Antisense; TAGTTTTAGACGCTGTCCGTGGCAC
>probe:Drosophila_2:1631618_s_at:422:191; Interrogation_Position=2388; Antisense; AACTTCGGCAAGCTGTGAGCGCGAT

Paste this into a BLAST search page for me
GAGATCGATGACACCAGCCAGGAGGAGATTGGGCCCATTCAGGAGCCGTATCAGGAGCCGTAAACACCTTTATTTAATGTAGATGTAATCCTGCCCTGCTCTTTCCCTTTTATATCCCAACAGATCAACAGATCCCAATACTTTCCAATAATAAGGCAAGCAGTGGTAGCTCCCCGGACACGATCCAACACTAGACTCTGACTAGACTCTGTTGGCGGTTCGGTGGTTCGGTGTTTCATGCTCTGTGGCCTGTGGCCTCCCCTTTTGTTTTGTATGTATTTATGTTGTGCTGTCCACCCCTAGTTTTAGACGCTGTCCGTGGCACAACTTCGGCAAGCTGTGAGCGCGAT

Full Affymetrix probeset data:

Annotations for 1631618_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720