FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1631696_s_at:

>probe:Drosophila_2:1631696_s_at:465:339; Interrogation_Position=1658; Antisense; GCTCAAAGCTCTTGTCTTCTTGGAA
>probe:Drosophila_2:1631696_s_at:355:585; Interrogation_Position=1678; Antisense; TGGAACAAGGCCCTCAAGCAGCTGG
>probe:Drosophila_2:1631696_s_at:104:199; Interrogation_Position=1708; Antisense; AACGATAGCCGTGTGCTGTTCGGAA
>probe:Drosophila_2:1631696_s_at:252:657; Interrogation_Position=1809; Antisense; TAAGAAGTGGCAGAGTCCCGCCTTC
>probe:Drosophila_2:1631696_s_at:439:115; Interrogation_Position=1837; Antisense; AACTCGAACAAGATTGCCAACCCGC
>probe:Drosophila_2:1631696_s_at:493:153; Interrogation_Position=1886; Antisense; ACATGTTCGACTCCTCAGAGGTGGA
>probe:Drosophila_2:1631696_s_at:442:209; Interrogation_Position=1924; Antisense; AAGCAGTCCATCGTGGAGTCGATCA
>probe:Drosophila_2:1631696_s_at:211:37; Interrogation_Position=1945; Antisense; ATCATCGAGAAGGTCGGCACGCGCT
>probe:Drosophila_2:1631696_s_at:337:215; Interrogation_Position=1972; Antisense; AAGATCTGCGATGTCCAGCTGGACG
>probe:Drosophila_2:1631696_s_at:459:555; Interrogation_Position=2037; Antisense; GGACGCCGGCACGATTCACAAAGAG
>probe:Drosophila_2:1631696_s_at:730:95; Interrogation_Position=2060; Antisense; AGATCAACGGCTGGTGGTTCGACAA
>probe:Drosophila_2:1631696_s_at:607:395; Interrogation_Position=2080; Antisense; GACAAGCGCCTGATTTCGATTAAAT
>probe:Drosophila_2:1631696_s_at:424:699; Interrogation_Position=2104; Antisense; TTCTTAAGACTGGAACGCTACCTGA
>probe:Drosophila_2:1631696_s_at:410:695; Interrogation_Position=2159; Antisense; TTTACTTTCACACCAACGAGGCAGC

Paste this into a BLAST search page for me
GCTCAAAGCTCTTGTCTTCTTGGAATGGAACAAGGCCCTCAAGCAGCTGGAACGATAGCCGTGTGCTGTTCGGAATAAGAAGTGGCAGAGTCCCGCCTTCAACTCGAACAAGATTGCCAACCCGCACATGTTCGACTCCTCAGAGGTGGAAAGCAGTCCATCGTGGAGTCGATCAATCATCGAGAAGGTCGGCACGCGCTAAGATCTGCGATGTCCAGCTGGACGGGACGCCGGCACGATTCACAAAGAGAGATCAACGGCTGGTGGTTCGACAAGACAAGCGCCTGATTTCGATTAAATTTCTTAAGACTGGAACGCTACCTGATTTACTTTCACACCAACGAGGCAGC

Full Affymetrix probeset data:

Annotations for 1631696_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720