FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1631701_a_at:

>probe:Drosophila_2:1631701_a_at:469:417; Interrogation_Position=1033; Antisense; GAGCGACTCCGCCAGGCAGCAAAGT
>probe:Drosophila_2:1631701_a_at:190:219; Interrogation_Position=1054; Antisense; AAGTCCCACTAAGTGTCGAGCCTGA
>probe:Drosophila_2:1631701_a_at:250:273; Interrogation_Position=1087; Antisense; CATTCACAGCCATATGTTCCCGCTA
>probe:Drosophila_2:1631701_a_at:234:11; Interrogation_Position=1160; Antisense; ATTCCCCATGCATTTGCCGAGTGAT
>probe:Drosophila_2:1631701_a_at:385:183; Interrogation_Position=1193; Antisense; AAAACCTATAACAAGCCATCGCAAT
>probe:Drosophila_2:1631701_a_at:594:599; Interrogation_Position=1259; Antisense; TGTCAACATATCGAGTGGCAACCGG
>probe:Drosophila_2:1631701_a_at:650:583; Interrogation_Position=1274; Antisense; TGGCAACCGGAGAATATTCGCACAT
>probe:Drosophila_2:1631701_a_at:700:689; Interrogation_Position=1288; Antisense; TATTCGCACATAAGTCCGATCCCAT
>probe:Drosophila_2:1631701_a_at:407:503; Interrogation_Position=1301; Antisense; GTCCGATCCCATGTTATTTCGTATT
>probe:Drosophila_2:1631701_a_at:416:15; Interrogation_Position=1323; Antisense; ATTTATTTATCTGTCGAACTGTCGA
>probe:Drosophila_2:1631701_a_at:105:721; Interrogation_Position=880; Antisense; TTCCGCATCAATCACATGACCAAGG
>probe:Drosophila_2:1631701_a_at:150:311; Interrogation_Position=899; Antisense; CCAAGGACCTTAAGGCGCAGATCAA
>probe:Drosophila_2:1631701_a_at:510:651; Interrogation_Position=920; Antisense; TCAAGGCGATCCATCTGGAGGAGAT
>probe:Drosophila_2:1631701_a_at:175:553; Interrogation_Position=951; Antisense; GGAGCTGACCGAGCAGATCCATATG

Paste this into a BLAST search page for me
GAGCGACTCCGCCAGGCAGCAAAGTAAGTCCCACTAAGTGTCGAGCCTGACATTCACAGCCATATGTTCCCGCTAATTCCCCATGCATTTGCCGAGTGATAAAACCTATAACAAGCCATCGCAATTGTCAACATATCGAGTGGCAACCGGTGGCAACCGGAGAATATTCGCACATTATTCGCACATAAGTCCGATCCCATGTCCGATCCCATGTTATTTCGTATTATTTATTTATCTGTCGAACTGTCGATTCCGCATCAATCACATGACCAAGGCCAAGGACCTTAAGGCGCAGATCAATCAAGGCGATCCATCTGGAGGAGATGGAGCTGACCGAGCAGATCCATATG

Full Affymetrix probeset data:

Annotations for 1631701_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720