FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1631728_s_at:

>probe:Drosophila_2:1631728_s_at:651:699; Interrogation_Position=2555; Antisense; TTTTCACTTCGTCCACTTTTCGCTA
>probe:Drosophila_2:1631728_s_at:338:503; Interrogation_Position=2565; Antisense; GTCCACTTTTCGCTATCAATGGGTG
>probe:Drosophila_2:1631728_s_at:595:693; Interrogation_Position=2572; Antisense; TTTCGCTATCAATGGGTGAAGGCAT
>probe:Drosophila_2:1631728_s_at:428:371; Interrogation_Position=2589; Antisense; GAAGGCATATATCTGAACACTTATT
>probe:Drosophila_2:1631728_s_at:246:677; Interrogation_Position=2656; Antisense; TAGAACCTTCTTTTTTATATGCTAA
>probe:Drosophila_2:1631728_s_at:666:23; Interrogation_Position=2672; Antisense; ATATGCTAAACACCTTGCTTATTTG
>probe:Drosophila_2:1631728_s_at:214:187; Interrogation_Position=2680; Antisense; AACACCTTGCTTATTTGACACTACA
>probe:Drosophila_2:1631728_s_at:110:399; Interrogation_Position=2696; Antisense; GACACTACAATACCAATCAGCCTCT
>probe:Drosophila_2:1631728_s_at:517:673; Interrogation_Position=2706; Antisense; TACCAATCAGCCTCTCACATATATG
>probe:Drosophila_2:1631728_s_at:325:35; Interrogation_Position=2711; Antisense; ATCAGCCTCTCACATATATGCATGA
>probe:Drosophila_2:1631728_s_at:206:269; Interrogation_Position=2731; Antisense; CATGAGTTCCATGCGTGTATGTGTG
>probe:Drosophila_2:1631728_s_at:590:629; Interrogation_Position=2738; Antisense; TCCATGCGTGTATGTGTGATTCAAA
>probe:Drosophila_2:1631728_s_at:241:405; Interrogation_Position=2843; Antisense; GACTACATACATTCAAACTCAAAAA
>probe:Drosophila_2:1631728_s_at:497:395; Interrogation_Position=2884; Antisense; GAAATATTTCAAACAAGCAGCAAGA

Paste this into a BLAST search page for me
TTTTCACTTCGTCCACTTTTCGCTAGTCCACTTTTCGCTATCAATGGGTGTTTCGCTATCAATGGGTGAAGGCATGAAGGCATATATCTGAACACTTATTTAGAACCTTCTTTTTTATATGCTAAATATGCTAAACACCTTGCTTATTTGAACACCTTGCTTATTTGACACTACAGACACTACAATACCAATCAGCCTCTTACCAATCAGCCTCTCACATATATGATCAGCCTCTCACATATATGCATGACATGAGTTCCATGCGTGTATGTGTGTCCATGCGTGTATGTGTGATTCAAAGACTACATACATTCAAACTCAAAAAGAAATATTTCAAACAAGCAGCAAGA

Full Affymetrix probeset data:

Annotations for 1631728_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720