FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1631741_a_at:

>probe:Drosophila_2:1631741_a_at:441:567; Interrogation_Position=4903; Antisense; GGCACGTTTATAGCCCTGGATCGCA
>probe:Drosophila_2:1631741_a_at:197:47; Interrogation_Position=4927; Antisense; ATCCTGCAGCACATTCACAAGTCAG
>probe:Drosophila_2:1631741_a_at:520:111; Interrogation_Position=4934; Antisense; AGCACATTCACAAGTCAGACTACGT
>probe:Drosophila_2:1631741_a_at:199:265; Interrogation_Position=4949; Antisense; CAGACTACGTGGACATTTTTGGCAT
>probe:Drosophila_2:1631741_a_at:398:519; Interrogation_Position=4957; Antisense; GTGGACATTTTTGGCATCGTGTTTG
>probe:Drosophila_2:1631741_a_at:563:39; Interrogation_Position=4972; Antisense; ATCGTGTTTGCCATGCGAAAGGAGC
>probe:Drosophila_2:1631741_a_at:542:289; Interrogation_Position=4987; Antisense; CGAAAGGAGCGCGTTTTTATGGTGC
>probe:Drosophila_2:1631741_a_at:259:297; Interrogation_Position=4996; Antisense; CGCGTTTTTATGGTGCAGACGGAAC
>probe:Drosophila_2:1631741_a_at:484:561; Interrogation_Position=5016; Antisense; GGAACAGCAGTATGTGTGCATCCAT
>probe:Drosophila_2:1631741_a_at:12:681; Interrogation_Position=5026; Antisense; TATGTGTGCATCCATCAGTGTCTGC
>probe:Drosophila_2:1631741_a_at:290:307; Interrogation_Position=5037; Antisense; CCATCAGTGTCTGCTGGCGGTGCTG
>probe:Drosophila_2:1631741_a_at:244:75; Interrogation_Position=5069; Antisense; AGGAGCACCTGCTGGCCGATTCGCT
>probe:Drosophila_2:1631741_a_at:63:463; Interrogation_Position=5086; Antisense; GATTCGCTCGAGCTGCACGCCAACG
>probe:Drosophila_2:1631741_a_at:532:617; Interrogation_Position=5099; Antisense; TGCACGCCAACGATGGCTACGAAGT

Paste this into a BLAST search page for me
GGCACGTTTATAGCCCTGGATCGCAATCCTGCAGCACATTCACAAGTCAGAGCACATTCACAAGTCAGACTACGTCAGACTACGTGGACATTTTTGGCATGTGGACATTTTTGGCATCGTGTTTGATCGTGTTTGCCATGCGAAAGGAGCCGAAAGGAGCGCGTTTTTATGGTGCCGCGTTTTTATGGTGCAGACGGAACGGAACAGCAGTATGTGTGCATCCATTATGTGTGCATCCATCAGTGTCTGCCCATCAGTGTCTGCTGGCGGTGCTGAGGAGCACCTGCTGGCCGATTCGCTGATTCGCTCGAGCTGCACGCCAACGTGCACGCCAACGATGGCTACGAAGT

Full Affymetrix probeset data:

Annotations for 1631741_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720