FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1631743_at:

>probe:Drosophila_2:1631743_at:295:529; Interrogation_Position=103; Antisense; GGGAGCTGTCTGGAAAATGAAAAAC
>probe:Drosophila_2:1631743_at:658:189; Interrogation_Position=125; Antisense; AACATGGCCGATGGTATGTGCGTTT
>probe:Drosophila_2:1631743_at:179:61; Interrogation_Position=140; Antisense; ATGTGCGTTTTGTAGCGGAAACTCA
>probe:Drosophila_2:1631743_at:575:675; Interrogation_Position=152; Antisense; TAGCGGAAACTCAAGCGGATGCTTC
>probe:Drosophila_2:1631743_at:370:253; Interrogation_Position=163; Antisense; CAAGCGGATGCTTCGCCAGCAAAAA
>probe:Drosophila_2:1631743_at:407:653; Interrogation_Position=18; Antisense; TAATAAGCCAAAACGACTGAACAAG
>probe:Drosophila_2:1631743_at:328:165; Interrogation_Position=209; Antisense; AAATCAAACATGGAGCAGCGACTGC
>probe:Drosophila_2:1631743_at:274:353; Interrogation_Position=223; Antisense; GCAGCGACTGCTGAGCTTGTTTTAA
>probe:Drosophila_2:1631743_at:643:419; Interrogation_Position=235; Antisense; GAGCTTGTTTTAATCAGCACAGGAC
>probe:Drosophila_2:1631743_at:427:701; Interrogation_Position=242; Antisense; TTTTAATCAGCACAGGACCATCCGC
>probe:Drosophila_2:1631743_at:662:397; Interrogation_Position=257; Antisense; GACCATCCGCCGAGGGCCAGTTGGT
>probe:Drosophila_2:1631743_at:634:93; Interrogation_Position=275; Antisense; AGTTGGTGTGGCCTCTGATCGGATA
>probe:Drosophila_2:1631743_at:423:565; Interrogation_Position=47; Antisense; GGCAGGCAAAAAATAGTCACTTTGA
>probe:Drosophila_2:1631743_at:90:237; Interrogation_Position=58; Antisense; AATAGTCACTTTGAATCGGAACAGA

Paste this into a BLAST search page for me
GGGAGCTGTCTGGAAAATGAAAAACAACATGGCCGATGGTATGTGCGTTTATGTGCGTTTTGTAGCGGAAACTCATAGCGGAAACTCAAGCGGATGCTTCCAAGCGGATGCTTCGCCAGCAAAAATAATAAGCCAAAACGACTGAACAAGAAATCAAACATGGAGCAGCGACTGCGCAGCGACTGCTGAGCTTGTTTTAAGAGCTTGTTTTAATCAGCACAGGACTTTTAATCAGCACAGGACCATCCGCGACCATCCGCCGAGGGCCAGTTGGTAGTTGGTGTGGCCTCTGATCGGATAGGCAGGCAAAAAATAGTCACTTTGAAATAGTCACTTTGAATCGGAACAGA

Full Affymetrix probeset data:

Annotations for 1631743_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720