FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1631772_a_at:

>probe:Drosophila_2:1631772_a_at:668:369; Interrogation_Position=3646; Antisense; GAATGTGGCGTGCAAAATTAAGTAA
>probe:Drosophila_2:1631772_a_at:635:203; Interrogation_Position=3674; Antisense; AAGCCCAATAATTTGAACTGTAACT
>probe:Drosophila_2:1631772_a_at:500:239; Interrogation_Position=3701; Antisense; AATCAAGAAGCGTCAACTACAAACA
>probe:Drosophila_2:1631772_a_at:266:405; Interrogation_Position=3801; Antisense; GACGAAAGTTCGGTCATTCAAAGAG
>probe:Drosophila_2:1631772_a_at:459:13; Interrogation_Position=3816; Antisense; ATTCAAAGAGCTATCCCACACACGC
>probe:Drosophila_2:1631772_a_at:372:123; Interrogation_Position=3885; Antisense; AGCCCAAACCCACATATAGCATATT
>probe:Drosophila_2:1631772_a_at:704:651; Interrogation_Position=3924; Antisense; TAATTAGTACGAGTCTAAGCCGCAT
>probe:Drosophila_2:1631772_a_at:43:489; Interrogation_Position=3930; Antisense; GTACGAGTCTAAGCCGCATATAATA
>probe:Drosophila_2:1631772_a_at:614:217; Interrogation_Position=3954; Antisense; AAGTATGTACATCCGTTGTGTATGA
>probe:Drosophila_2:1631772_a_at:58:231; Interrogation_Position=3998; Antisense; AATGTCGTCTAGACTCTAGAGATAG
>probe:Drosophila_2:1631772_a_at:602:263; Interrogation_Position=4053; Antisense; CAGAAGCACGCAGAGCATAAAGAGA
>probe:Drosophila_2:1631772_a_at:652:193; Interrogation_Position=4104; Antisense; AACGTTTCGATTGTAAGCCAACATA
>probe:Drosophila_2:1631772_a_at:675:465; Interrogation_Position=4112; Antisense; GATTGTAAGCCAACATACTTTAACT
>probe:Drosophila_2:1631772_a_at:205:265; Interrogation_Position=4132; Antisense; TAACTTAACGACCTAAGCAATTTTG

Paste this into a BLAST search page for me
GAATGTGGCGTGCAAAATTAAGTAAAAGCCCAATAATTTGAACTGTAACTAATCAAGAAGCGTCAACTACAAACAGACGAAAGTTCGGTCATTCAAAGAGATTCAAAGAGCTATCCCACACACGCAGCCCAAACCCACATATAGCATATTTAATTAGTACGAGTCTAAGCCGCATGTACGAGTCTAAGCCGCATATAATAAAGTATGTACATCCGTTGTGTATGAAATGTCGTCTAGACTCTAGAGATAGCAGAAGCACGCAGAGCATAAAGAGAAACGTTTCGATTGTAAGCCAACATAGATTGTAAGCCAACATACTTTAACTTAACTTAACGACCTAAGCAATTTTG

Full Affymetrix probeset data:

Annotations for 1631772_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720