FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1631828_s_at:

>probe:Drosophila_2:1631828_s_at:94:277; Interrogation_Position=2990; Antisense; CTTTAAGCGTGGCAACAGCGGTCAC
>probe:Drosophila_2:1631828_s_at:440:121; Interrogation_Position=3006; Antisense; AGCGGTCACGGCAATGCGTTTGTCA
>probe:Drosophila_2:1631828_s_at:500:233; Interrogation_Position=3018; Antisense; AATGCGTTTGTCAGCCGGCACAACT
>probe:Drosophila_2:1631828_s_at:386:407; Interrogation_Position=3106; Antisense; GACTGGGCATGAACATCAACCGCTT
>probe:Drosophila_2:1631828_s_at:597:651; Interrogation_Position=3121; Antisense; TCAACCGCTTCGTCTTCTGAGAAAG
>probe:Drosophila_2:1631828_s_at:602:77; Interrogation_Position=3154; Antisense; AGGATAGCGAGCACACCGGAGGCCA
>probe:Drosophila_2:1631828_s_at:2:549; Interrogation_Position=3171; Antisense; GGAGGCCACTAGAACATATACTTGT
>probe:Drosophila_2:1631828_s_at:710:389; Interrogation_Position=3205; Antisense; GAAACACGCGCATACTAATCGAAAT
>probe:Drosophila_2:1631828_s_at:259:113; Interrogation_Position=3249; Antisense; AGCACGTTCACAACCAATCGAGATA
>probe:Drosophila_2:1631828_s_at:284:683; Interrogation_Position=3274; Antisense; TATGCGCCTACGTATATCGAAGTGT
>probe:Drosophila_2:1631828_s_at:371:107; Interrogation_Position=3302; Antisense; AGAAACGCGCTTACCGATCGCTTGT
>probe:Drosophila_2:1631828_s_at:317:341; Interrogation_Position=3329; Antisense; GCTACCTCCTTGAGTTGTTGTCGAT
>probe:Drosophila_2:1631828_s_at:699:319; Interrogation_Position=3394; Antisense; GCCCGTTGCCCCAAAAATCATTATA
>probe:Drosophila_2:1631828_s_at:337:15; Interrogation_Position=3413; Antisense; ATTATACTCATCCACTCATACGAAC

Paste this into a BLAST search page for me
CTTTAAGCGTGGCAACAGCGGTCACAGCGGTCACGGCAATGCGTTTGTCAAATGCGTTTGTCAGCCGGCACAACTGACTGGGCATGAACATCAACCGCTTTCAACCGCTTCGTCTTCTGAGAAAGAGGATAGCGAGCACACCGGAGGCCAGGAGGCCACTAGAACATATACTTGTGAAACACGCGCATACTAATCGAAATAGCACGTTCACAACCAATCGAGATATATGCGCCTACGTATATCGAAGTGTAGAAACGCGCTTACCGATCGCTTGTGCTACCTCCTTGAGTTGTTGTCGATGCCCGTTGCCCCAAAAATCATTATAATTATACTCATCCACTCATACGAAC

Full Affymetrix probeset data:

Annotations for 1631828_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720