FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1631842_at:

>probe:Drosophila_2:1631842_at:216:371; Interrogation_Position=125; Antisense; GAATGGAGCATCGTCTGGCTGGACA
>probe:Drosophila_2:1631842_at:590:693; Interrogation_Position=274; Antisense; TTTGCATACGCAACAACACCTGTCA
>probe:Drosophila_2:1631842_at:266:19; Interrogation_Position=299; Antisense; ATATACCCGCCTACAAACGTCGTTG
>probe:Drosophila_2:1631842_at:325:543; Interrogation_Position=342; Antisense; GGATAGTACCTTTTTCGATACCCAT
>probe:Drosophila_2:1631842_at:355:557; Interrogation_Position=378; Antisense; GGACTACAAGCACGTGACTGTCACC
>probe:Drosophila_2:1631842_at:636:511; Interrogation_Position=391; Antisense; GTGACTGTCACCTATGACTGCAAGT
>probe:Drosophila_2:1631842_at:226:491; Interrogation_Position=414; Antisense; GTACAACGATATGACCATGCTGCAT
>probe:Drosophila_2:1631842_at:596:345; Interrogation_Position=435; Antisense; GCATGACCTTAAAGTCCGCGTTTTA
>probe:Drosophila_2:1631842_at:629:635; Interrogation_Position=468; Antisense; TCGAACCCCTGTGCTCAAAGATTTA
>probe:Drosophila_2:1631842_at:54:175; Interrogation_Position=492; Antisense; AAACCAGGCCTTATACTTTCTAGAG
>probe:Drosophila_2:1631842_at:646:343; Interrogation_Position=562; Antisense; GCATTCTGCTTTGAGTGCTCTATTT
>probe:Drosophila_2:1631842_at:73:621; Interrogation_Position=577; Antisense; TGCTCTATTTTTTCCACTGTGTACA
>probe:Drosophila_2:1631842_at:688:101; Interrogation_Position=615; Antisense; AGAGCAGACAGCCTCCTGGTATTGA
>probe:Drosophila_2:1631842_at:19:29; Interrogation_Position=69; Antisense; ATACCTCACGCTTTTTGACAACATC

Paste this into a BLAST search page for me
GAATGGAGCATCGTCTGGCTGGACATTTGCATACGCAACAACACCTGTCAATATACCCGCCTACAAACGTCGTTGGGATAGTACCTTTTTCGATACCCATGGACTACAAGCACGTGACTGTCACCGTGACTGTCACCTATGACTGCAAGTGTACAACGATATGACCATGCTGCATGCATGACCTTAAAGTCCGCGTTTTATCGAACCCCTGTGCTCAAAGATTTAAAACCAGGCCTTATACTTTCTAGAGGCATTCTGCTTTGAGTGCTCTATTTTGCTCTATTTTTTCCACTGTGTACAAGAGCAGACAGCCTCCTGGTATTGAATACCTCACGCTTTTTGACAACATC

Full Affymetrix probeset data:

Annotations for 1631842_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720