FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1631940_s_at:

>probe:Drosophila_2:1631940_s_at:677:327; Interrogation_Position=3509; Antisense; GCGATTCAACGCAGGTCAGCAGATA
>probe:Drosophila_2:1631940_s_at:24:351; Interrogation_Position=3527; Antisense; GCAGATAAACGCACCTGAGCTCGGC
>probe:Drosophila_2:1631940_s_at:505:281; Interrogation_Position=3546; Antisense; CTCGGCGCGAATTTTCGGTTTCTAT
>probe:Drosophila_2:1631940_s_at:152:453; Interrogation_Position=3642; Antisense; GATCTAATCTACTCATCTCACGTAA
>probe:Drosophila_2:1631940_s_at:413:649; Interrogation_Position=3659; Antisense; TCACGTAATTGTAAATCCCCTCCCA
>probe:Drosophila_2:1631940_s_at:493:269; Interrogation_Position=3682; Antisense; CATCCCAAGTATGTTGCCCTGCTAG
>probe:Drosophila_2:1631940_s_at:570:319; Interrogation_Position=3697; Antisense; GCCCTGCTAGCATGAAAATCGTAAA
>probe:Drosophila_2:1631940_s_at:203:549; Interrogation_Position=3729; Antisense; GGAGTTCCCCAAATGACCTTAAATG
>probe:Drosophila_2:1631940_s_at:465:33; Interrogation_Position=3758; Antisense; ATCAGAGACCAAACAACCCAACATT
>probe:Drosophila_2:1631940_s_at:660:57; Interrogation_Position=3792; Antisense; ATGAGTGTCCGTTTCTTCACACATA
>probe:Drosophila_2:1631940_s_at:195:713; Interrogation_Position=3807; Antisense; TTCACACATACACCACCAATAGAGC
>probe:Drosophila_2:1631940_s_at:702:421; Interrogation_Position=3828; Antisense; GAGCAACCAAGCAACATTTCACGAT
>probe:Drosophila_2:1631940_s_at:350:511; Interrogation_Position=3946; Antisense; GTGACATGATGTCCCCAGAAAGTAA
>probe:Drosophila_2:1631940_s_at:441:59; Interrogation_Position=3975; Antisense; ATGATTGCGTTTAATGGTTGGCTAA

Paste this into a BLAST search page for me
GCGATTCAACGCAGGTCAGCAGATAGCAGATAAACGCACCTGAGCTCGGCCTCGGCGCGAATTTTCGGTTTCTATGATCTAATCTACTCATCTCACGTAATCACGTAATTGTAAATCCCCTCCCACATCCCAAGTATGTTGCCCTGCTAGGCCCTGCTAGCATGAAAATCGTAAAGGAGTTCCCCAAATGACCTTAAATGATCAGAGACCAAACAACCCAACATTATGAGTGTCCGTTTCTTCACACATATTCACACATACACCACCAATAGAGCGAGCAACCAAGCAACATTTCACGATGTGACATGATGTCCCCAGAAAGTAAATGATTGCGTTTAATGGTTGGCTAA

Full Affymetrix probeset data:

Annotations for 1631940_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720