FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1632043_a_at:

>probe:Drosophila_2:1632043_a_at:688:93; Interrogation_Position=5813; Antisense; AGTTCCTCAGCCGAAGGCGTCTGGA
>probe:Drosophila_2:1632043_a_at:370:589; Interrogation_Position=5834; Antisense; TGGATCCCAGCTATGTGACCACAGT
>probe:Drosophila_2:1632043_a_at:139:649; Interrogation_Position=5858; Antisense; TCAGTGGACCGGACTTGCAGCGAGC
>probe:Drosophila_2:1632043_a_at:460:415; Interrogation_Position=5879; Antisense; GAGCCTTCTGCGTGATCAATTACTA
>probe:Drosophila_2:1632043_a_at:172:521; Interrogation_Position=5932; Antisense; GTGGACTTGAGCACGGGCACAGTTA
>probe:Drosophila_2:1632043_a_at:397:495; Interrogation_Position=5966; Antisense; GTCTTTTATACGAATTCCGCCGGCT
>probe:Drosophila_2:1632043_a_at:76:299; Interrogation_Position=6000; Antisense; CGCGCACACCATATTTGGCCTAATG
>probe:Drosophila_2:1632043_a_at:368:231; Interrogation_Position=6021; Antisense; AATGAAGATCCTACAGTCACTGGCC
>probe:Drosophila_2:1632043_a_at:502:511; Interrogation_Position=6055; Antisense; GTGACTCTGGATGAGGCAGCCCTTC
>probe:Drosophila_2:1632043_a_at:16:715; Interrogation_Position=6077; Antisense; TTCTGGCGTACACCATGGGTGACCA
>probe:Drosophila_2:1632043_a_at:10:703; Interrogation_Position=6124; Antisense; TTTTGCTAGACCCATATTACTGTAC
>probe:Drosophila_2:1632043_a_at:557:701; Interrogation_Position=6177; Antisense; TTATTTCAAAATTTCGCCGCCACTT
>probe:Drosophila_2:1632043_a_at:86:321; Interrogation_Position=6192; Antisense; GCCGCCACTTATAATCGAAACTTTG
>probe:Drosophila_2:1632043_a_at:579:479; Interrogation_Position=6224; Antisense; GTTTGCTGCCCAACTCTTGAAATTA

Paste this into a BLAST search page for me
AGTTCCTCAGCCGAAGGCGTCTGGATGGATCCCAGCTATGTGACCACAGTTCAGTGGACCGGACTTGCAGCGAGCGAGCCTTCTGCGTGATCAATTACTAGTGGACTTGAGCACGGGCACAGTTAGTCTTTTATACGAATTCCGCCGGCTCGCGCACACCATATTTGGCCTAATGAATGAAGATCCTACAGTCACTGGCCGTGACTCTGGATGAGGCAGCCCTTCTTCTGGCGTACACCATGGGTGACCATTTTGCTAGACCCATATTACTGTACTTATTTCAAAATTTCGCCGCCACTTGCCGCCACTTATAATCGAAACTTTGGTTTGCTGCCCAACTCTTGAAATTA

Full Affymetrix probeset data:

Annotations for 1632043_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720