FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1632121_a_at:

>probe:Drosophila_2:1632121_a_at:422:91; Interrogation_Position=1295; Antisense; AGTATCAGCGCCAGTATCCCGGCCG
>probe:Drosophila_2:1632121_a_at:629:285; Interrogation_Position=1314; Antisense; CGGCCGCCGTACAATGTGGTAAACA
>probe:Drosophila_2:1632121_a_at:654:537; Interrogation_Position=1331; Antisense; GGTAAACACCCACGATGAGAACATA
>probe:Drosophila_2:1632121_a_at:483:107; Interrogation_Position=1348; Antisense; AGAACATACGCCAGAGCGGCTCCTT
>probe:Drosophila_2:1632121_a_at:390:337; Interrogation_Position=1366; Antisense; GCTCCTTCAATCGTCTCATGTACAG
>probe:Drosophila_2:1632121_a_at:310:601; Interrogation_Position=1384; Antisense; TGTACAGCGTGATTGGTGCCACCGA
>probe:Drosophila_2:1632121_a_at:300:5; Interrogation_Position=1395; Antisense; ATTGGTGCCACCGAGTACTAGAAAG
>probe:Drosophila_2:1632121_a_at:224:431; Interrogation_Position=1407; Antisense; GAGTACTAGAAAGTGCAGCTGCAAC
>probe:Drosophila_2:1632121_a_at:438:189; Interrogation_Position=1464; Antisense; AACATCGGCAACATCTGCTGCACTT
>probe:Drosophila_2:1632121_a_at:223:621; Interrogation_Position=1479; Antisense; TGCTGCACTTGTTTTATCTCCTAAC
>probe:Drosophila_2:1632121_a_at:445:511; Interrogation_Position=1574; Antisense; GTGAACCACTAACAAGCTTGATGAT
>probe:Drosophila_2:1632121_a_at:99:3; Interrogation_Position=1606; Antisense; ATTGGTAATCAATTGGCATCGAAAT
>probe:Drosophila_2:1632121_a_at:87:459; Interrogation_Position=1639; Antisense; GATATAAACACCACTTAACGCCGCC
>probe:Drosophila_2:1632121_a_at:515:315; Interrogation_Position=1661; Antisense; GCCTCAACCTAATTACTGTCTGCAT

Paste this into a BLAST search page for me
AGTATCAGCGCCAGTATCCCGGCCGCGGCCGCCGTACAATGTGGTAAACAGGTAAACACCCACGATGAGAACATAAGAACATACGCCAGAGCGGCTCCTTGCTCCTTCAATCGTCTCATGTACAGTGTACAGCGTGATTGGTGCCACCGAATTGGTGCCACCGAGTACTAGAAAGGAGTACTAGAAAGTGCAGCTGCAACAACATCGGCAACATCTGCTGCACTTTGCTGCACTTGTTTTATCTCCTAACGTGAACCACTAACAAGCTTGATGATATTGGTAATCAATTGGCATCGAAATGATATAAACACCACTTAACGCCGCCGCCTCAACCTAATTACTGTCTGCAT

Full Affymetrix probeset data:

Annotations for 1632121_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720