FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1632146_a_at:

>probe:Drosophila_2:1632146_a_at:7:651; Interrogation_Position=3143; Antisense; TCACTCAACACGCTCTACGAGATGT
>probe:Drosophila_2:1632146_a_at:522:137; Interrogation_Position=3159; Antisense; ACGAGATGTCTCGTGAGTCGCTCAA
>probe:Drosophila_2:1632146_a_at:462:87; Interrogation_Position=3174; Antisense; AGTCGCTCAACTCGATCGTGAAGAA
>probe:Drosophila_2:1632146_a_at:106:375; Interrogation_Position=3196; Antisense; GAAGATCGACGCAATTGTACCAAAA
>probe:Drosophila_2:1632146_a_at:89:193; Interrogation_Position=3224; Antisense; AACTCGGGCTACTTCAGTGTAACGC
>probe:Drosophila_2:1632146_a_at:212:661; Interrogation_Position=3243; Antisense; TAACGCCTTAACAATGGTCGCTCGC
>probe:Drosophila_2:1632146_a_at:653:337; Interrogation_Position=3262; Antisense; GCTCGCTTTATTTTTGGCACTCATG
>probe:Drosophila_2:1632146_a_at:560:567; Interrogation_Position=3277; Antisense; GGCACTCATGTTTTATCCTTGTATA
>probe:Drosophila_2:1632146_a_at:331:507; Interrogation_Position=3325; Antisense; GTGCGTACTCCTAGATCTTAGACTT
>probe:Drosophila_2:1632146_a_at:68:179; Interrogation_Position=3460; Antisense; AAAACCTTTTCTATATGCGGCCTCT
>probe:Drosophila_2:1632146_a_at:50:53; Interrogation_Position=3474; Antisense; ATGCGGCCTCTGTGCGGCAGGACAA
>probe:Drosophila_2:1632146_a_at:587:237; Interrogation_Position=3572; Antisense; AATCGTCTCACTTTATTTTCACAAC
>probe:Drosophila_2:1632146_a_at:9:701; Interrogation_Position=3587; Antisense; TTTTCACAACATCCATCTGTTCAGC
>probe:Drosophila_2:1632146_a_at:566:641; Interrogation_Position=3602; Antisense; TCTGTTCAGCACAATCTCCACTAGA

Paste this into a BLAST search page for me
TCACTCAACACGCTCTACGAGATGTACGAGATGTCTCGTGAGTCGCTCAAAGTCGCTCAACTCGATCGTGAAGAAGAAGATCGACGCAATTGTACCAAAAAACTCGGGCTACTTCAGTGTAACGCTAACGCCTTAACAATGGTCGCTCGCGCTCGCTTTATTTTTGGCACTCATGGGCACTCATGTTTTATCCTTGTATAGTGCGTACTCCTAGATCTTAGACTTAAAACCTTTTCTATATGCGGCCTCTATGCGGCCTCTGTGCGGCAGGACAAAATCGTCTCACTTTATTTTCACAACTTTTCACAACATCCATCTGTTCAGCTCTGTTCAGCACAATCTCCACTAGA

Full Affymetrix probeset data:

Annotations for 1632146_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720