FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1632202_at:

>probe:Drosophila_2:1632202_at:629:707; Interrogation_Position=1089; Antisense; TTAAGCGTTTCCTACGCGACGATGT
>probe:Drosophila_2:1632202_at:458:335; Interrogation_Position=1114; Antisense; GCTCCGTTCGCTGATAACGCGTATA
>probe:Drosophila_2:1632202_at:250:221; Interrogation_Position=1140; Antisense; AAGTGTACTGCGATGGACTCACCGA
>probe:Drosophila_2:1632202_at:615:277; Interrogation_Position=1187; Antisense; CTGTACATTAGTGAGCCGCCGAGAC
>probe:Drosophila_2:1632202_at:77:423; Interrogation_Position=1207; Antisense; GAGACGTGTGTTCTTCAGCCTGCCT
>probe:Drosophila_2:1632202_at:509:415; Interrogation_Position=1257; Antisense; GAGCAGTAGTTCAGTTTTCCGAGTA
>probe:Drosophila_2:1632202_at:207:693; Interrogation_Position=1272; Antisense; TTTCCGAGTACTTATTCCGTGGCGA
>probe:Drosophila_2:1632202_at:351:533; Interrogation_Position=1312; Antisense; GGTGGCCCAGGCTAAACAGATTCTG
>probe:Drosophila_2:1632202_at:341:81; Interrogation_Position=1377; Antisense; AGGGACTCCCGGATGATACGCACTT
>probe:Drosophila_2:1632202_at:519:555; Interrogation_Position=1417; Antisense; GGACGCTGATTGCATAGACGATTCT
>probe:Drosophila_2:1632202_at:56:413; Interrogation_Position=1450; Antisense; GACCAGTTCGATGCCAAAGCCGGAA
>probe:Drosophila_2:1632202_at:486:635; Interrogation_Position=1478; Antisense; TCGCGCAGCCTTTACATGGTGGGAA
>probe:Drosophila_2:1632202_at:317:711; Interrogation_Position=1542; Antisense; TTCACTTTGTCCTAGCCGAGCGGTA
>probe:Drosophila_2:1632202_at:579:13; Interrogation_Position=1634; Antisense; ATTAATTGCATGTGTGCCCACGCAC

Paste this into a BLAST search page for me
TTAAGCGTTTCCTACGCGACGATGTGCTCCGTTCGCTGATAACGCGTATAAAGTGTACTGCGATGGACTCACCGACTGTACATTAGTGAGCCGCCGAGACGAGACGTGTGTTCTTCAGCCTGCCTGAGCAGTAGTTCAGTTTTCCGAGTATTTCCGAGTACTTATTCCGTGGCGAGGTGGCCCAGGCTAAACAGATTCTGAGGGACTCCCGGATGATACGCACTTGGACGCTGATTGCATAGACGATTCTGACCAGTTCGATGCCAAAGCCGGAATCGCGCAGCCTTTACATGGTGGGAATTCACTTTGTCCTAGCCGAGCGGTAATTAATTGCATGTGTGCCCACGCAC

Full Affymetrix probeset data:

Annotations for 1632202_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720