FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1632251_s_at:

>probe:Drosophila_2:1632251_s_at:645:183; Interrogation_Position=4042; Antisense; AAAAGGTTCTACTGTCGCTCATTCA
>probe:Drosophila_2:1632251_s_at:477:357; Interrogation_Position=4067; Antisense; GCAAATATCCGCTGACATGACCAAT
>probe:Drosophila_2:1632251_s_at:339:199; Interrogation_Position=4119; Antisense; AACGAGGCACTGTTGGCCATCAATA
>probe:Drosophila_2:1632251_s_at:107:243; Interrogation_Position=4140; Antisense; AATATGGCAGATCCCATTACCCGCG
>probe:Drosophila_2:1632251_s_at:98:509; Interrogation_Position=4179; Antisense; GTGCTCACCGAGCTGTATCGCAATT
>probe:Drosophila_2:1632251_s_at:432:483; Interrogation_Position=4193; Antisense; GTATCGCAATTGTCAGCAGTTCATT
>probe:Drosophila_2:1632251_s_at:561:107; Interrogation_Position=4219; Antisense; AGAACAGCCCCAAGAATTCGCAGTT
>probe:Drosophila_2:1632251_s_at:461:363; Interrogation_Position=4232; Antisense; GAATTCGCAGTTCAGCAACGTCCGT
>probe:Drosophila_2:1632251_s_at:611:197; Interrogation_Position=4248; Antisense; AACGTCCGTCTGCTGATGAAGGCAA
>probe:Drosophila_2:1632251_s_at:632:565; Interrogation_Position=4268; Antisense; GGCAATCATAACGTACCGCGATCAG
>probe:Drosophila_2:1632251_s_at:167:385; Interrogation_Position=4310; Antisense; GAACTATAACCTGGCCAGTGGCTGG
>probe:Drosophila_2:1632251_s_at:383:693; Interrogation_Position=4336; Antisense; TTTGATAGATTACCCATCCGATCCC
>probe:Drosophila_2:1632251_s_at:631:631; Interrogation_Position=4352; Antisense; TCCGATCCCCATCCAAGATAGTTAA
>probe:Drosophila_2:1632251_s_at:727:171; Interrogation_Position=4445; Antisense; AAAGCTCTCAGCTAAGTTCATCCCT

Paste this into a BLAST search page for me
AAAAGGTTCTACTGTCGCTCATTCAGCAAATATCCGCTGACATGACCAATAACGAGGCACTGTTGGCCATCAATAAATATGGCAGATCCCATTACCCGCGGTGCTCACCGAGCTGTATCGCAATTGTATCGCAATTGTCAGCAGTTCATTAGAACAGCCCCAAGAATTCGCAGTTGAATTCGCAGTTCAGCAACGTCCGTAACGTCCGTCTGCTGATGAAGGCAAGGCAATCATAACGTACCGCGATCAGGAACTATAACCTGGCCAGTGGCTGGTTTGATAGATTACCCATCCGATCCCTCCGATCCCCATCCAAGATAGTTAAAAAGCTCTCAGCTAAGTTCATCCCT

Full Affymetrix probeset data:

Annotations for 1632251_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720