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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1632321_a_at:

>probe:Drosophila_2:1632321_a_at:256:57; Interrogation_Position=1020; Antisense; ATGGAACTGGTTGCCTCTGGTCGGT
>probe:Drosophila_2:1632321_a_at:357:475; Interrogation_Position=1043; Antisense; GTTTTATTCGGTGCTCGGTCAAAGA
>probe:Drosophila_2:1632321_a_at:639:687; Interrogation_Position=1090; Antisense; TATATAAGTGGACCGTCGCTGGCCC
>probe:Drosophila_2:1632321_a_at:380:609; Interrogation_Position=1115; Antisense; TGAGCACTTTCAATGTCGCCATGTT
>probe:Drosophila_2:1632321_a_at:31:441; Interrogation_Position=1272; Antisense; GATGGGCCTTACTTGGATATTCAAT
>probe:Drosophila_2:1632321_a_at:435:711; Interrogation_Position=1291; Antisense; TTCAATGTCATTCCGTATTCTGCAC
>probe:Drosophila_2:1632321_a_at:619:355; Interrogation_Position=1312; Antisense; GCACGGCTCCACATTTTCTGGGAAT
>probe:Drosophila_2:1632321_a_at:22:25; Interrogation_Position=1348; Antisense; ATATCCGAGTATTTTCACAGCGCGT
>probe:Drosophila_2:1632321_a_at:471:5; Interrogation_Position=1378; Antisense; ATTGTTTTGTTCGTTCTGCTCGTCC
>probe:Drosophila_2:1632321_a_at:670:613; Interrogation_Position=1403; Antisense; TGAAGCGCAGCACATGGACTCTAAT
>probe:Drosophila_2:1632321_a_at:110:305; Interrogation_Position=860; Antisense; CCGTCATCAGCTACCATACGTGGAA
>probe:Drosophila_2:1632321_a_at:542:393; Interrogation_Position=882; Antisense; GAAAGTCTTGACGTCGCTCAATCGA
>probe:Drosophila_2:1632321_a_at:24:661; Interrogation_Position=915; Antisense; TAACTATCGGTTCCTGCGGTACAAC
>probe:Drosophila_2:1632321_a_at:665:499; Interrogation_Position=946; Antisense; GTCTGGAGCACAGCCGCAATCATGA

Paste this into a BLAST search page for me
ATGGAACTGGTTGCCTCTGGTCGGTGTTTTATTCGGTGCTCGGTCAAAGATATATAAGTGGACCGTCGCTGGCCCTGAGCACTTTCAATGTCGCCATGTTGATGGGCCTTACTTGGATATTCAATTTCAATGTCATTCCGTATTCTGCACGCACGGCTCCACATTTTCTGGGAATATATCCGAGTATTTTCACAGCGCGTATTGTTTTGTTCGTTCTGCTCGTCCTGAAGCGCAGCACATGGACTCTAATCCGTCATCAGCTACCATACGTGGAAGAAAGTCTTGACGTCGCTCAATCGATAACTATCGGTTCCTGCGGTACAACGTCTGGAGCACAGCCGCAATCATGA

Full Affymetrix probeset data:

Annotations for 1632321_a_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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