FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1632409_a_at:

>probe:Drosophila_2:1632409_a_at:164:649; Interrogation_Position=1544; Antisense; TACTCGTCTACGAAATGGCCGCCGG
>probe:Drosophila_2:1632409_a_at:259:473; Interrogation_Position=1578; Antisense; GTTCTTTGCGGATCAGCCGATTCAG
>probe:Drosophila_2:1632409_a_at:55:423; Interrogation_Position=1609; Antisense; GAGAAGATCGTCTCCGGCAAGGTGC
>probe:Drosophila_2:1632409_a_at:152:691; Interrogation_Position=1648; Antisense; TTTGGCTCCGATCTGAAGGACCTAC
>probe:Drosophila_2:1632409_a_at:62:611; Interrogation_Position=1697; Antisense; TGACCAAGCGCTACGGCAATCTGAA
>probe:Drosophila_2:1632409_a_at:665:129; Interrogation_Position=1765; Antisense; ACCGACTGGATTGCGATCTTCCAAA
>probe:Drosophila_2:1632409_a_at:470:69; Interrogation_Position=1799; Antisense; AGGCGCCGTTCATTCCGCGGTGTAA
>probe:Drosophila_2:1632409_a_at:63:223; Interrogation_Position=1822; Antisense; AAGGGTCCCGGCGACACGAGCAATT
>probe:Drosophila_2:1632409_a_at:9:331; Interrogation_Position=1872; Antisense; GCGGATCTCCAGCACCGAGAAGTGT
>probe:Drosophila_2:1632409_a_at:405:505; Interrogation_Position=1895; Antisense; GTGCCAAGGAGTTTGCTGAATTCTA
>probe:Drosophila_2:1632409_a_at:473:245; Interrogation_Position=1913; Antisense; AATTCTAGAGGAGCTCTTCGCCAGT
>probe:Drosophila_2:1632409_a_at:702:359; Interrogation_Position=1968; Antisense; GCAACTGCAATTGTATCCGCTACTG
>probe:Drosophila_2:1632409_a_at:302:623; Interrogation_Position=1991; Antisense; TGCGATTGTATCTGCAACTGCTCCT
>probe:Drosophila_2:1632409_a_at:329:501; Interrogation_Position=2063; Antisense; GTCGTCGTCTTGTCTATATGTCTAC

Paste this into a BLAST search page for me
TACTCGTCTACGAAATGGCCGCCGGGTTCTTTGCGGATCAGCCGATTCAGGAGAAGATCGTCTCCGGCAAGGTGCTTTGGCTCCGATCTGAAGGACCTACTGACCAAGCGCTACGGCAATCTGAAACCGACTGGATTGCGATCTTCCAAAAGGCGCCGTTCATTCCGCGGTGTAAAAGGGTCCCGGCGACACGAGCAATTGCGGATCTCCAGCACCGAGAAGTGTGTGCCAAGGAGTTTGCTGAATTCTAAATTCTAGAGGAGCTCTTCGCCAGTGCAACTGCAATTGTATCCGCTACTGTGCGATTGTATCTGCAACTGCTCCTGTCGTCGTCTTGTCTATATGTCTAC

Full Affymetrix probeset data:

Annotations for 1632409_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720