Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1632415_s_at:

>probe:Drosophila_2:1632415_s_at:496:29; Interrogation_Position=3697; Antisense; ATAAACGAGAGTCTTCCGCTCAGCA
>probe:Drosophila_2:1632415_s_at:159:719; Interrogation_Position=3710; Antisense; TTCCGCTCAGCACACGTAAAGTAAT
>probe:Drosophila_2:1632415_s_at:444:31; Interrogation_Position=3743; Antisense; ATAACACTACAATCGCTGTTCGACT
>probe:Drosophila_2:1632415_s_at:718:43; Interrogation_Position=3754; Antisense; ATCGCTGTTCGACTTTAAGATCCAA
>probe:Drosophila_2:1632415_s_at:638:473; Interrogation_Position=3808; Antisense; GTTAGAATCCCTTCTGTATAAGCTA
>probe:Drosophila_2:1632415_s_at:700:727; Interrogation_Position=3843; Antisense; TTGTGAGCCTAGTGAACCTAGCCTA
>probe:Drosophila_2:1632415_s_at:31:381; Interrogation_Position=3856; Antisense; GAACCTAGCCTACTTCAAGCAGAGT
>probe:Drosophila_2:1632415_s_at:417:99; Interrogation_Position=3876; Antisense; AGAGTGCTCGCCGTTGAACGTATTT
>probe:Drosophila_2:1632415_s_at:56:251; Interrogation_Position=3950; Antisense; TAAACCGCCCCGAGTACAGATCGTT
>probe:Drosophila_2:1632415_s_at:278:491; Interrogation_Position=3963; Antisense; GTACAGATCGTTGTGCTTCAATTTT
>probe:Drosophila_2:1632415_s_at:680:71; Interrogation_Position=3989; Antisense; AGGTCTTGACAGTTGACTTTTGGCA
>probe:Drosophila_2:1632415_s_at:543:675; Interrogation_Position=4064; Antisense; TATTTCCGGGCCGTATTACTTACTG
>probe:Drosophila_2:1632415_s_at:341:451; Interrogation_Position=4205; Antisense; GATCTTAGCAAACGGCTGGCAACTA
>probe:Drosophila_2:1632415_s_at:44:701; Interrogation_Position=4238; Antisense; TTTATAAGCGCAACCACAACACCAT

Paste this into a BLAST search page for me
ATAAACGAGAGTCTTCCGCTCAGCATTCCGCTCAGCACACGTAAAGTAATATAACACTACAATCGCTGTTCGACTATCGCTGTTCGACTTTAAGATCCAAGTTAGAATCCCTTCTGTATAAGCTATTGTGAGCCTAGTGAACCTAGCCTAGAACCTAGCCTACTTCAAGCAGAGTAGAGTGCTCGCCGTTGAACGTATTTTAAACCGCCCCGAGTACAGATCGTTGTACAGATCGTTGTGCTTCAATTTTAGGTCTTGACAGTTGACTTTTGGCATATTTCCGGGCCGTATTACTTACTGGATCTTAGCAAACGGCTGGCAACTATTTATAAGCGCAACCACAACACCAT

Full Affymetrix probeset data:

Annotations for 1632415_s_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime