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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1632448_s_at:

>probe:Drosophila_2:1632448_s_at:531:199; Interrogation_Position=5612; Antisense; AACGAAATGCTATGCGACTGGAATT
>probe:Drosophila_2:1632448_s_at:586:185; Interrogation_Position=5680; Antisense; AAAATTGGATGCTCCGTTCTCATTG
>probe:Drosophila_2:1632448_s_at:484:293; Interrogation_Position=5694; Antisense; CGTTCTCATTGCTTTGTTGTTCATA
>probe:Drosophila_2:1632448_s_at:10:19; Interrogation_Position=5765; Antisense; ATCTGTTCGTAATATACTCGTTCTA
>probe:Drosophila_2:1632448_s_at:331:269; Interrogation_Position=5799; Antisense; CATGCCAGGGATTTTTGCGTTTGAA
>probe:Drosophila_2:1632448_s_at:79:691; Interrogation_Position=5818; Antisense; TTTGAATTTTGGTCGCTCTAGGCTC
>probe:Drosophila_2:1632448_s_at:459:337; Interrogation_Position=5839; Antisense; GCTCGATTCGCCGATTTAGCCGATA
>probe:Drosophila_2:1632448_s_at:285:675; Interrogation_Position=5855; Antisense; TAGCCGATATGTTTTCCTATGCTCC
>probe:Drosophila_2:1632448_s_at:613:719; Interrogation_Position=5868; Antisense; TTCCTATGCTCCCTCATATGGATAG
>probe:Drosophila_2:1632448_s_at:63:343; Interrogation_Position=5993; Antisense; GCTTTATTCTTACTCGTTTACTCTT
>probe:Drosophila_2:1632448_s_at:168:21; Interrogation_Position=6033; Antisense; ATTTGTTGGCTGCAATTTCTCGCTA
>probe:Drosophila_2:1632448_s_at:574:615; Interrogation_Position=6043; Antisense; TGCAATTTCTCGCTATGTCTACAAG
>probe:Drosophila_2:1632448_s_at:91:209; Interrogation_Position=6065; Antisense; AAGCTTTGTCTAAATCGCTGATAAG
>probe:Drosophila_2:1632448_s_at:9:285; Interrogation_Position=6133; Antisense; CTGCTGCTCTTGATGTTGACTTTGT

Paste this into a BLAST search page for me
AACGAAATGCTATGCGACTGGAATTAAAATTGGATGCTCCGTTCTCATTGCGTTCTCATTGCTTTGTTGTTCATAATCTGTTCGTAATATACTCGTTCTACATGCCAGGGATTTTTGCGTTTGAATTTGAATTTTGGTCGCTCTAGGCTCGCTCGATTCGCCGATTTAGCCGATATAGCCGATATGTTTTCCTATGCTCCTTCCTATGCTCCCTCATATGGATAGGCTTTATTCTTACTCGTTTACTCTTATTTGTTGGCTGCAATTTCTCGCTATGCAATTTCTCGCTATGTCTACAAGAAGCTTTGTCTAAATCGCTGATAAGCTGCTGCTCTTGATGTTGACTTTGT

Full Affymetrix probeset data:

Annotations for 1632448_s_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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