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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1632457_s_at:

>probe:Drosophila_2:1632457_s_at:285:295; Interrogation_Position=7561; Antisense; CGAGCAATGTCGTTAGGTGTTCAGA
>probe:Drosophila_2:1632457_s_at:584:677; Interrogation_Position=7574; Antisense; TAGGTGTTCAGATGCCGCCTCGCTA
>probe:Drosophila_2:1632457_s_at:103:283; Interrogation_Position=7592; Antisense; CTCGCTATGCAGTTCCATTGATCAG
>probe:Drosophila_2:1632457_s_at:531:629; Interrogation_Position=7605; Antisense; TCCATTGATCAGTTTCCCCGCGAAA
>probe:Drosophila_2:1632457_s_at:640:531; Interrogation_Position=7632; Antisense; GGTGGCCAATCACGACGAGATTCAG
>probe:Drosophila_2:1632457_s_at:618:113; Interrogation_Position=7655; Antisense; AGCAGCAATCCGAACTTGATATCAA
>probe:Drosophila_2:1632457_s_at:179:337; Interrogation_Position=7698; Antisense; GCTGCCAGCGGCAAACCATAACATA
>probe:Drosophila_2:1632457_s_at:98:191; Interrogation_Position=7717; Antisense; AACATACCATACCATGCTTACCATC
>probe:Drosophila_2:1632457_s_at:178:305; Interrogation_Position=7728; Antisense; CCATGCTTACCATCTCGAAACTTTA
>probe:Drosophila_2:1632457_s_at:238:517; Interrogation_Position=7756; Antisense; TGCATTGCAATTGCTTTAAAGCCTG
>probe:Drosophila_2:1632457_s_at:550:201; Interrogation_Position=7774; Antisense; AAGCCTGTTCGGATTTTCGGACAAG
>probe:Drosophila_2:1632457_s_at:76:423; Interrogation_Position=7817; Antisense; GAGACGTGTGGTTTTTCATTTGATT
>probe:Drosophila_2:1632457_s_at:450:261; Interrogation_Position=7862; Antisense; CAGCCTTCTGTTTGCCGTTTTGTTG
>probe:Drosophila_2:1632457_s_at:29:305; Interrogation_Position=7876; Antisense; CCGTTTTGTTGTTCTCCGAGATTGA

Paste this into a BLAST search page for me
CGAGCAATGTCGTTAGGTGTTCAGATAGGTGTTCAGATGCCGCCTCGCTACTCGCTATGCAGTTCCATTGATCAGTCCATTGATCAGTTTCCCCGCGAAAGGTGGCCAATCACGACGAGATTCAGAGCAGCAATCCGAACTTGATATCAAGCTGCCAGCGGCAAACCATAACATAAACATACCATACCATGCTTACCATCCCATGCTTACCATCTCGAAACTTTATGCATTGCAATTGCTTTAAAGCCTGAAGCCTGTTCGGATTTTCGGACAAGGAGACGTGTGGTTTTTCATTTGATTCAGCCTTCTGTTTGCCGTTTTGTTGCCGTTTTGTTGTTCTCCGAGATTGA

Full Affymetrix probeset data:

Annotations for 1632457_s_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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