FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1632612_s_at:

>probe:Drosophila_2:1632612_s_at:594:427; Interrogation_Position=1683; Antisense; GAGATTGATCAGCAGCTTCGCGCCA
>probe:Drosophila_2:1632612_s_at:189:47; Interrogation_Position=1707; Antisense; ATCCAGGAATCCTCCATGGGCTCCA
>probe:Drosophila_2:1632612_s_at:348:153; Interrogation_Position=1733; Antisense; ACAGAGCTTCCCAGTGACGCGGCGC
>probe:Drosophila_2:1632612_s_at:286:609; Interrogation_Position=1760; Antisense; TGAGCGCGGCTACAGCAGTGACATT
>probe:Drosophila_2:1632612_s_at:362:85; Interrogation_Position=1776; Antisense; AGTGACATTGAGTCGGTGCGCTCTA
>probe:Drosophila_2:1632612_s_at:668:613; Interrogation_Position=1876; Antisense; TGAACCAGCGCTACCACAACAATCG
>probe:Drosophila_2:1632612_s_at:608:161; Interrogation_Position=1894; Antisense; ACAATCGCCGCGACGAGGATGACTA
>probe:Drosophila_2:1632612_s_at:471:523; Interrogation_Position=1928; Antisense; GGGCGATCATCAGCGTGACCAGCAG
>probe:Drosophila_2:1632612_s_at:38:611; Interrogation_Position=1943; Antisense; TGACCAGCAGCGTGGCTACAACGAT
>probe:Drosophila_2:1632612_s_at:706:137; Interrogation_Position=1963; Antisense; ACGATCGCGGCGGTGGTGACAACAC
>probe:Drosophila_2:1632612_s_at:703:187; Interrogation_Position=1983; Antisense; AACACTGGCAGCTATCGTGGAGGCG
>probe:Drosophila_2:1632612_s_at:155:301; Interrogation_Position=2062; Antisense; CGCCACGCAACGATCAGCAGAATGG
>probe:Drosophila_2:1632612_s_at:726:65; Interrogation_Position=2083; Antisense; ATGGCAGGGACTATCAGCACCACAA
>probe:Drosophila_2:1632612_s_at:161:199; Interrogation_Position=2106; Antisense; AACCACACCACCGAAGAGGTGCGGG

Paste this into a BLAST search page for me
GAGATTGATCAGCAGCTTCGCGCCAATCCAGGAATCCTCCATGGGCTCCAACAGAGCTTCCCAGTGACGCGGCGCTGAGCGCGGCTACAGCAGTGACATTAGTGACATTGAGTCGGTGCGCTCTATGAACCAGCGCTACCACAACAATCGACAATCGCCGCGACGAGGATGACTAGGGCGATCATCAGCGTGACCAGCAGTGACCAGCAGCGTGGCTACAACGATACGATCGCGGCGGTGGTGACAACACAACACTGGCAGCTATCGTGGAGGCGCGCCACGCAACGATCAGCAGAATGGATGGCAGGGACTATCAGCACCACAAAACCACACCACCGAAGAGGTGCGGG

Full Affymetrix probeset data:

Annotations for 1632612_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720