FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1632629_a_at:

>probe:Drosophila_2:1632629_a_at:381:661; Interrogation_Position=3633; Antisense; TAACAAATCGCAAACGCAACCGTTC
>probe:Drosophila_2:1632629_a_at:50:31; Interrogation_Position=3694; Antisense; ATACATAACTGGAGATGGCAGCTTA
>probe:Drosophila_2:1632629_a_at:679:565; Interrogation_Position=3710; Antisense; GGCAGCTTAAAGTTAAACGACTCAT
>probe:Drosophila_2:1632629_a_at:370:53; Interrogation_Position=3772; Antisense; ATGCAGCTAATGGTCGCGTGAATTC
>probe:Drosophila_2:1632629_a_at:201:535; Interrogation_Position=3783; Antisense; GGTCGCGTGAATTCGTTTTGAAACA
>probe:Drosophila_2:1632629_a_at:211:159; Interrogation_Position=3805; Antisense; ACACAATTCTGGACACTTCTGGGCA
>probe:Drosophila_2:1632629_a_at:188:287; Interrogation_Position=3813; Antisense; CTGGACACTTCTGGGCATTTTTAAA
>probe:Drosophila_2:1632629_a_at:73:161; Interrogation_Position=3865; Antisense; AAAGAAATTCACTCCTCCATGTAGC
>probe:Drosophila_2:1632629_a_at:417:111; Interrogation_Position=3887; Antisense; AGCAATGGATTGCACTGTATTATAA
>probe:Drosophila_2:1632629_a_at:2:441; Interrogation_Position=4023; Antisense; GATGTTGACAATAAAGGAACCCTTA
>probe:Drosophila_2:1632629_a_at:367:455; Interrogation_Position=4082; Antisense; GATATATGGGCGACCTTCTATTACC
>probe:Drosophila_2:1632629_a_at:664:325; Interrogation_Position=4091; Antisense; GCGACCTTCTATTACCCGCAAAGAA
>probe:Drosophila_2:1632629_a_at:562:705; Interrogation_Position=4102; Antisense; TTACCCGCAAAGAATACGCAGATGG
>probe:Drosophila_2:1632629_a_at:617:263; Interrogation_Position=4120; Antisense; CAGATGGAACACACGCAGTTTGCAA

Paste this into a BLAST search page for me
TAACAAATCGCAAACGCAACCGTTCATACATAACTGGAGATGGCAGCTTAGGCAGCTTAAAGTTAAACGACTCATATGCAGCTAATGGTCGCGTGAATTCGGTCGCGTGAATTCGTTTTGAAACAACACAATTCTGGACACTTCTGGGCACTGGACACTTCTGGGCATTTTTAAAAAAGAAATTCACTCCTCCATGTAGCAGCAATGGATTGCACTGTATTATAAGATGTTGACAATAAAGGAACCCTTAGATATATGGGCGACCTTCTATTACCGCGACCTTCTATTACCCGCAAAGAATTACCCGCAAAGAATACGCAGATGGCAGATGGAACACACGCAGTTTGCAA

Full Affymetrix probeset data:

Annotations for 1632629_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720