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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1632651_s_at:

>probe:Drosophila_2:1632651_s_at:596:515; Interrogation_Position=1061; Antisense; GTGTCCGCCTGCATGATGGGTATCA
>probe:Drosophila_2:1632651_s_at:674:63; Interrogation_Position=1076; Antisense; ATGGGTATCAGCACCCTGATCATGG
>probe:Drosophila_2:1632651_s_at:501:605; Interrogation_Position=1092; Antisense; TGATCATGGCTCTTTACTTTGGCAT
>probe:Drosophila_2:1632651_s_at:370:607; Interrogation_Position=1119; Antisense; TGATGAAATCTGGAGTCGGCTGGCT
>probe:Drosophila_2:1632651_s_at:112:15; Interrogation_Position=1169; Antisense; ATTATTGGATTCTCCCTGGGATTCG
>probe:Drosophila_2:1632651_s_at:49:319; Interrogation_Position=1217; Antisense; GCCGAGCTCTTTGCCGAGGATGTAA
>probe:Drosophila_2:1632651_s_at:229:661; Interrogation_Position=1239; Antisense; TAAAGGCCCTAGCAGGATCGATTGC
>probe:Drosophila_2:1632651_s_at:657:513; Interrogation_Position=1279; Antisense; GTGTTTTGCTTTTATCGTGACCCTT
>probe:Drosophila_2:1632651_s_at:597:711; Interrogation_Position=1302; Antisense; TTCTTTTCCCTGTTCTTAACGATAT
>probe:Drosophila_2:1632651_s_at:144:421; Interrogation_Position=1332; Antisense; GAGCAACCGCGTGCTTTGCAATCTT
>probe:Drosophila_2:1632651_s_at:641:237; Interrogation_Position=1351; Antisense; AATCTTCTTCGGATTTGCGGTGGCC
>probe:Drosophila_2:1632651_s_at:606:685; Interrogation_Position=1379; Antisense; TTTGTCTTCATTCTCTTCCTAATTC
>probe:Drosophila_2:1632651_s_at:561:573; Interrogation_Position=1456; Antisense; GGCCGAATAGTACTTGCAATCTTTT
>probe:Drosophila_2:1632651_s_at:124:67; Interrogation_Position=1504; Antisense; ATGGATCTCTGACCAAACTTTTGAT

Paste this into a BLAST search page for me
GTGTCCGCCTGCATGATGGGTATCAATGGGTATCAGCACCCTGATCATGGTGATCATGGCTCTTTACTTTGGCATTGATGAAATCTGGAGTCGGCTGGCTATTATTGGATTCTCCCTGGGATTCGGCCGAGCTCTTTGCCGAGGATGTAATAAAGGCCCTAGCAGGATCGATTGCGTGTTTTGCTTTTATCGTGACCCTTTTCTTTTCCCTGTTCTTAACGATATGAGCAACCGCGTGCTTTGCAATCTTAATCTTCTTCGGATTTGCGGTGGCCTTTGTCTTCATTCTCTTCCTAATTCGGCCGAATAGTACTTGCAATCTTTTATGGATCTCTGACCAAACTTTTGAT

Full Affymetrix probeset data:

Annotations for 1632651_s_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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