FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1632665_a_at:

>probe:Drosophila_2:1632665_a_at:652:271; Interrogation_Position=1232; Antisense; CATCAATGCCAATCGCTATGCGGAG
>probe:Drosophila_2:1632665_a_at:331:561; Interrogation_Position=1350; Antisense; GGCAAGGTGGCCTCCAAGTTTATGC
>probe:Drosophila_2:1632665_a_at:548:217; Interrogation_Position=1365; Antisense; AAGTTTATGCGGCTCATGGGTATCA
>probe:Drosophila_2:1632665_a_at:442:339; Interrogation_Position=1376; Antisense; GCTCATGGGTATCAAGAACGCTGGT
>probe:Drosophila_2:1632665_a_at:552:381; Interrogation_Position=1391; Antisense; GAACGCTGGTACGTCCGGCAATGAC
>probe:Drosophila_2:1632665_a_at:521:579; Interrogation_Position=1428; Antisense; GGCCAGGCGGAGTCCACCAATGGAA
>probe:Drosophila_2:1632665_a_at:677:199; Interrogation_Position=1514; Antisense; AACGAAAGTGCCCACGGACGTGCAG
>probe:Drosophila_2:1632665_a_at:688:311; Interrogation_Position=1543; Antisense; GCCAGCGCATGTTCTCCAACATGGA
>probe:Drosophila_2:1632665_a_at:262:633; Interrogation_Position=1632; Antisense; TCCCAGCCACGTACTTTCTAGAAGG
>probe:Drosophila_2:1632665_a_at:21:633; Interrogation_Position=1680; Antisense; TCCCTGCCAGGCTGTAAATACCATG
>probe:Drosophila_2:1632665_a_at:158:601; Interrogation_Position=1692; Antisense; TGTAAATACCATGCCACTCACTCAA
>probe:Drosophila_2:1632665_a_at:298:259; Interrogation_Position=1706; Antisense; CACTCACTCAACTCATTAGTCAGTC
>probe:Drosophila_2:1632665_a_at:396:89; Interrogation_Position=1723; Antisense; AGTCAGTCAATATGTTTCTCCTCAA
>probe:Drosophila_2:1632665_a_at:508:59; Interrogation_Position=1734; Antisense; ATGTTTCTCCTCAACAACTTTTTGT

Paste this into a BLAST search page for me
CATCAATGCCAATCGCTATGCGGAGGGCAAGGTGGCCTCCAAGTTTATGCAAGTTTATGCGGCTCATGGGTATCAGCTCATGGGTATCAAGAACGCTGGTGAACGCTGGTACGTCCGGCAATGACGGCCAGGCGGAGTCCACCAATGGAAAACGAAAGTGCCCACGGACGTGCAGGCCAGCGCATGTTCTCCAACATGGATCCCAGCCACGTACTTTCTAGAAGGTCCCTGCCAGGCTGTAAATACCATGTGTAAATACCATGCCACTCACTCAACACTCACTCAACTCATTAGTCAGTCAGTCAGTCAATATGTTTCTCCTCAAATGTTTCTCCTCAACAACTTTTTGT

Full Affymetrix probeset data:

Annotations for 1632665_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720